| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3048 |
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| Symbol | acoR |
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| ID | 3521885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3183913 |
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| End bp | 3185889 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637285500 |
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| Product | acetoin catabolism regulatory protein |
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| Protein accession | YP_269747 |
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| Protein GI | 71281413 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.368788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAACTT CCATCATTGA TGAACATCTA TCTAATGTTT ATAGATCAAT TGAGAGTAAT
GAGTTAGATT CAGAAAAAAA CTTAGTCACT AGTTCATGGA AACGCTGTAT TCAAACCTTT
AAGCTTGACC CTTTGGGCCG ACATGGTTCA CGCGTTCTTA CCCAGTCTGA ATTGCAAAAT
CATACCTCCC CTATGGAAGA ATTTATCATT ACGGCAAGAG AGGGGATGGA AAATTTATAC
TCACAAGTAG AAGCATTAGA TTATGTTGTT TTACTTTGTG ATAAAAACGC TGTTACGGTT
GATTTTATTG GTAATAATCG CTTAACCAAA GACTTAAGAA ACGCAGGGTT ATATTTGGGT
GCTGACTGGA ATGAACGTCA TGCTGGAACC TGCGCAGTCG GTACAATTAT CAACGAGCTT
GTTCCGCTAA CAATTCACCA ACAAGATCAT TTTGACATCG TAAATACAAC GTTAACTTGC
TCTGCCTCAC CTATTTTAGA TCATAATGGT CAGCTATTGG CTGTACTTGA TGTCTCAGCG
CTTTCTTCAC CAAAAGAAAA AACGAGTCAA CACTTGTTGC TTAAATTGGT ACAGATGCAT
GCTGGACTTA TTGAGGCCGC TAATTTTTTA AATTATTATA GCAATTCCAC AATTTTAAAA
TTCGATATAA ACATTAGTGC TCTGAATACT TATTGTCCAA ATTTAATTGC TTTGGATAGT
AACAATGTAG TGATTGCGGC GAATCAAAAT GCTCGAACAA TTATTGCGAG AGAACTTGGA
ATTAATGACA TCAGATCACA GTTACTCACT GGATTTGATA TCACTTCGTT ATTTCAATTA
GGAGCAGGTC TTAACAACTC TTCTGCACAG ATTATTATCA AATCGAAAAA CACGGGCATT
GCATTTTATT GCAATTTCCA ACCACCACGC ATTAAAATCA GAAATACGGT GTTAAACCAA
ACTAGCTCAA TTAAGCAAGA CAACACAAAG CCGATTGCCG CAGAAATTGA CAAAATTGCG
GGATCCGATC CCGTGATGCA GAAAGTAAAA TTGCTGCTCA ATAAATTTTC TCCAACTGAT
ATTAATATGT TGATCCAAGG TGAAACAGGG ACTGGCAAAG AAGTCTTGGC TAATGCTATT
CATCTGTGTA GTAATCGTCG TAAAGGACCG TTTATAGCTG TTAATTGTGC GGCTCTGCCT
GATTCTCTCA TTGAAAGTGA GTTGTTTGGT TATAAAGCGG GAAGTTTTAC CGGTGCGAGC
AGCAAAGGTA AAACGGGACT CATTCTCGCC GCGGATAAAG GAACGTTATT TTTAGACGAA
ATCGGAGATA TGCCCGCTAC CCTGCAAACT CGATTATTAA GAGTATTGGC AGAAAAAGTA
GTGACACCCG TAGGTTCTGA TCAAGCAATT GCTGTAGACT TTCGTCTTAT TAGCGCTACT
CATCAAGATA TCTCACCACA AATTGATTCG GAACAGTCTA CCTTCAGAGC CGATTTATAT
CATCGTCTAA ATGGTGCAAC AATTAATTTA CCCGCATTAC GTGATCGTCA AGATCTGCAC
TATTTAGTAT CATGTCTTGT TAGCAGTGAG TCGAAAATTG GTTTATCGAA AGAGGCAATG
CAAATACTCG CTGAATATTC TTGGCCAGGT AATATCCGTG AATTAAAAAA TGTCATCAGT
TACGCCAGTA CTCTGTGCGA TGATAATACC ATCACACCTG AACATTTACC TGAATATGTA
TTTGATTGTA CCCCATTTAT TTTCAACGAA AATGAGGGGA CACACATACA GCATGCTGAA
ATTTTGCCTG AACAAGGGCA AAAGATATTA GACACCTTGA GACACAATAA TTGGAATGCA
ACTGAAACGG CGAAACAGTT AGCAATTGGT AGAGCAACAC TTTATCGAAA AATGAAAAAG
TACAGTATTG TTTCTCCCAA TAATTCAGAT GTAGATAGTA CAGATAATAC AATCTAG
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| Protein sequence | MRTSIIDEHL SNVYRSIESN ELDSEKNLVT SSWKRCIQTF KLDPLGRHGS RVLTQSELQN
HTSPMEEFII TAREGMENLY SQVEALDYVV LLCDKNAVTV DFIGNNRLTK DLRNAGLYLG
ADWNERHAGT CAVGTIINEL VPLTIHQQDH FDIVNTTLTC SASPILDHNG QLLAVLDVSA
LSSPKEKTSQ HLLLKLVQMH AGLIEAANFL NYYSNSTILK FDINISALNT YCPNLIALDS
NNVVIAANQN ARTIIARELG INDIRSQLLT GFDITSLFQL GAGLNNSSAQ IIIKSKNTGI
AFYCNFQPPR IKIRNTVLNQ TSSIKQDNTK PIAAEIDKIA GSDPVMQKVK LLLNKFSPTD
INMLIQGETG TGKEVLANAI HLCSNRRKGP FIAVNCAALP DSLIESELFG YKAGSFTGAS
SKGKTGLILA ADKGTLFLDE IGDMPATLQT RLLRVLAEKV VTPVGSDQAI AVDFRLISAT
HQDISPQIDS EQSTFRADLY HRLNGATINL PALRDRQDLH YLVSCLVSSE SKIGLSKEAM
QILAEYSWPG NIRELKNVIS YASTLCDDNT ITPEHLPEYV FDCTPFIFNE NEGTHIQHAE
ILPEQGQKIL DTLRHNNWNA TETAKQLAIG RATLYRKMKK YSIVSPNNSD VDSTDNTI
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