| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3043 |
|---|
| Symbol | tatC2 |
|---|
| ID | 3522633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 3179711 |
|---|
| End bp | 3180469 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637285495 |
|---|
| Product | Sec-independent periplasmic protein translocation protein TatC |
|---|
| Protein accession | YP_269742 |
|---|
| Protein GI | 71282160 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
|---|
| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCTT CAACTAACCA ACACCTATTA TTCGACCATT TAATTGAATT AAGATCTAGG
TTACTTAAAG CTGTCTTGTC TGTTTTAGTA TTTTTTTGTT CGATGATCTA CTTTGCTAAT
GATATTTATG CGTATGTTTC CTTGCCTTTA TTGGCCGTTA TGCCTGAGAG CGGGCAAATG
ATTGCAACAG GTGTTGCTTC ATCATTTTTT GCTCCTTTTA AATTGACTAT CGTTTTAGCT
ATCTTCATCA GTATGCCTTA CATATTATTT CAAATATGGT CGTTTATCGC ACCGGGCTTA
TATCGCAATG AAAAAAAATT AATGGGCCCC TTAATGCTTG GGAGTAGCTT TCTTTTTTAT
GGCGGTATTT CTTTTGCGTA TTACGTGGTC TTTCCGATTG TTTTTGCATT TTTTACTTCT
GTTGCACCCG AAGGAGTAAA TATTGCTACT GACATTAGTA GCTATCTTGA TTTTGTTTTA
AAGCTGTTTT TTGCTTTTGG CATCGTATTT GAAATCCCTA TTGTGATTAT CTTATTATGT
TGGACAGGTT TTACGACTCC GAAGAGCTTA CGAGAAAAAA GACCCTATGT TGCTGTTGGA
TCTTTTGTTA TTGCGATGTT ATTAACACCG CCAGATATCA TTTCTCAAAC CTTATTAGCG
ATACCTATGC TTTTGCTATT TGAGTTTGGC GTTTTTATTT CCTCAATTTA TTATACGAAA
AGTGACGATG AACACGCCGA GGAAGAAAAT AATGAATAA
|
|---|
| Protein sequence | MSSSTNQHLL FDHLIELRSR LLKAVLSVLV FFCSMIYFAN DIYAYVSLPL LAVMPESGQM
IATGVASSFF APFKLTIVLA IFISMPYILF QIWSFIAPGL YRNEKKLMGP LMLGSSFLFY
GGISFAYYVV FPIVFAFFTS VAPEGVNIAT DISSYLDFVL KLFFAFGIVF EIPIVIILLC
WTGFTTPKSL REKRPYVAVG SFVIAMLLTP PDIISQTLLA IPMLLLFEFG VFISSIYYTK
SDDEHAEEEN NE
|
|---|
| |