| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3039 |
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| Symbol | |
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| ID | 3520473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3175947 |
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| End bp | 3177479 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637285491 |
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| Product | phopholipase D domain-containing protein |
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| Protein accession | YP_269738 |
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| Protein GI | 71280010 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGCGC TCCAACGTCT TCATGTAATC ATCATTTTAA TCGCCACTCT CTCTGGTTGT
GCCTCACTCC CCGAGGAGAT CAAGCATCCG GTTGAGCCAC TAGCGCCACA ATTAACGAGC
ACATTGTCTA CATTAACTGA CTCTTTTCAG CCTGAGCAGT CGACACAAGA AGAGAGCGCC
ATTCTGTTGC AGGACAATGG CTGGGATGCA TTGGCTCAGC GGTTGGCTCT GATTGAAACA
GCTGAGCAAA GTATCGATGT ACAGTATTAC ATTTGGAACG CAGATGCTTC GGGACTCTAC
TTGGCAAACC GCTTGATAGC GGCTGCCGAT CGCGGTGTTA AAGTACGCGT AATGCTGGAT
GATTTCAACC TAAGCGAACG GGAGAGTTTT CTAGCAGCAC TTGATCTTCA TCCTCAAATA
GAAATCCGAA TATTTAACCC TATTCCCAGT CGTCGCGGGG TAGTAAAGTG GCTAAATTTA
CTCAGTGATT TTTCTCGTCT AAATCGCCGT ATGCACAATA AATCGTTCAC CGTCGACGGC
GTTCTGTCTA TTGTAGGGGG CCGTAATATT GGCGACGAAT ATTTTGATCT TTCCGATGAA
ATAAATTTTC GTGACCGTGA TGTACTCGTT ATGGGCACCG TGGTAACTGA TATCCAAGCT
AGCTTTGTCA ATTACTGGAA CAGTGGTTGG TCTTACCCTA TTAATTTGCT TGCTGATAAA
GTCTCATCAG ATCTAGCGGT ACTAGATAAA GTGCCGGCTC CTCATTACAA ACACTACCCC
GCTTTGCCAG CAGGAAATAA GAGTGCTAAG AGCTTTTTAA AGGATATGAT GGACGAGATG
ACTTGGGTGC AAGCACGGTT TATTTCTGAT CGACCTGTCC CTGTCGATGT AGACAATACT
AATGAACCCA AAGCTACTGC TAAATTATTG GCCGAGTTAG CTAACCAATC AGACCAAGAG
ATCTTATTAG AATCCGCCTA TCTAATCTTT GATGATCGCC AACTAAAAGC ACTACAGATG
TTAACTGACA ATGGAGTGCA GATAAAAGCA TTGACCAATT CAATGGCCTC TAATGACCTA
GTTACTAATC ATTCGGGTTA CGCAGGTAGA CGTGAAGATA TGCTTGACCA CGGTATACAG
TTGTACGAAT TGAAACCCGA GACTACTCTG TGTGAAGAGT CGACTAGAGA CTTATCTAAA
TGTGCACCAA CAGCGGCCTA CGGTCTTCAT GCAAAATCGG CTGTTTATGA CAGGCGAGTG
ACTAGTATCG GCTCTTTTAA CTTCAATTTA CGCTCAACCT ACCTCAATAC AGAGTCCATT
CTAGTGATTG ACAATAAGCG AGTAGCTGAA ATGCTTGCTG ACGATATTGA GCAGGCGATG
AACGAAGATA ACAGTTGGCG TCTGAATCTA TATGAAGGAA AAGTCCGTTG GTATTCCGGT
GAAAAATCCT GGAATAGCGA ACCAGAAACA GTTCTAGGCG AACGAGTCAA ATCAAGTTTA
TTACAATTAT TACCGATAGA GAAATACTTG TGA
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| Protein sequence | MPALQRLHVI IILIATLSGC ASLPEEIKHP VEPLAPQLTS TLSTLTDSFQ PEQSTQEESA
ILLQDNGWDA LAQRLALIET AEQSIDVQYY IWNADASGLY LANRLIAAAD RGVKVRVMLD
DFNLSERESF LAALDLHPQI EIRIFNPIPS RRGVVKWLNL LSDFSRLNRR MHNKSFTVDG
VLSIVGGRNI GDEYFDLSDE INFRDRDVLV MGTVVTDIQA SFVNYWNSGW SYPINLLADK
VSSDLAVLDK VPAPHYKHYP ALPAGNKSAK SFLKDMMDEM TWVQARFISD RPVPVDVDNT
NEPKATAKLL AELANQSDQE ILLESAYLIF DDRQLKALQM LTDNGVQIKA LTNSMASNDL
VTNHSGYAGR REDMLDHGIQ LYELKPETTL CEESTRDLSK CAPTAAYGLH AKSAVYDRRV
TSIGSFNFNL RSTYLNTESI LVIDNKRVAE MLADDIEQAM NEDNSWRLNL YEGKVRWYSG
EKSWNSEPET VLGERVKSSL LQLLPIEKYL
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