Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3017 |
Symbol | |
ID | 3523006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3158584 |
End bp | 3159159 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637285469 |
Product | hypothetical protein |
Protein accession | YP_269716 |
Protein GI | 71282531 |
COG category | [S] Function unknown |
COG ID | [COG4430] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0476608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTGAAC CAGATCCATT GAGAATCAAG ACGTTTACCA CACCGAAAGA TCTCGGTGAG TGGCTAAAGG TGAATCATGG CTCTGAAAGA GAACTATGGG TGAAGATATA CAAAAAAAAT ACTGGGATTG AGAGTGTGAC TTGGAATGAT GTCGTGATCG AGGTTCTATG TTGGGGTTGG ATTGATGGTA TCAAGAAGTC AATCGATGAC CAAGCCTATC TTCAGCGCAT TACTCCCAGA AAAATGCGAA GCAATTGGTC TAAAAGGAAC ACAGAGCATG CTGAACGATT GATAAGTGAA GAGCGGATGA TGGAATCAGG ACTCGTGCAT ATTCGTGCTG CAAAATCGGA CGGTCGTTGG GAAAACGCCT ATGTAGTAAG TGAAATGGAA GTACCTGCAG ATTTCCTGGC GGCACTGGAG AATAAGTCGA ATGCTAAAGC GTTTTTTGAA ACGCTCAATA AATCCAGTCG TTATGTTATC GCTTACGGAT TGATAAGTGC AAAGAAGCCC GAAACTAGAC TAAGGCGGTT TGAAAAATTC ATGAATATGC TTGTTCACGA AGAAAAGCCC AAATAA
|
Protein sequence | MPEPDPLRIK TFTTPKDLGE WLKVNHGSER ELWVKIYKKN TGIESVTWND VVIEVLCWGW IDGIKKSIDD QAYLQRITPR KMRSNWSKRN TEHAERLISE ERMMESGLVH IRAAKSDGRW ENAYVVSEME VPADFLAALE NKSNAKAFFE TLNKSSRYVI AYGLISAKKP ETRLRRFEKF MNMLVHEEKP K
|
| |