Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2986 |
Symbol | |
ID | 3522208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3127769 |
End bp | 3128653 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637285439 |
Product | hypothetical protein |
Protein accession | YP_269686 |
Protein GI | 71281736 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0027982 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAT TTTATATATT TTCATCGCCT TCACTACGCG CTATTTTACA GTTCTCCATC ATTACTAGCT TATTATTTGT AAGCCTAGTA GGTCATGTAA AATCCGTAGA AGCGTTAATA GAATCATCTG CTGATAAAGT TGAAAATAAA AATAAAAAAC AACGGGTATT TTCGTTACCT AAACCAATGC TCGATGAGTT AATGAAAAAC ATGGTACTAG TTGAAGCAGG TAGCTTTGCG ATGGGCTCTG ACTCACCTTT AGCGAGAAAC CGTGAAAAAC CTGTCAGGCA AGTCAGTCTT GATGCTTTTT ACATTGGGAA ATATGAATTA ACTCAAGACC TGTTCGAGCA AATTATGGGG TGGAACAATA GTTTCTTCGC CTGTGATAAG TGTCCGGTAA ATAACATAAG TTGGTTTAAT ATGCTTTTAT TTATTGAGCG ATTAAATAGT GCTACTGGTA AAGAATTTAG TTTACCTACC GAAGCTCAGT GGGCATATGC TGCAAAAGGT GGCAATAAGT CTCAAAACTA TCGATACAGT GGTTCAAACA ATATTAACGA CGTTGCTTGG TTTGCTGATA ACGCAAAAAA TAAAAGCCAC CCTGTTGGCC TCAAAAAGCC TAACGAACTT GGTTTATACG ATATGACGGG GAATTTATGG GAATTTTGTC TTGATGACAT GAGCCGACAA GCTTATACCT TCACAGAGAG TCATAACCCT TTTATGGGTG ATAAAGAAAA CCTTAAACAA AAAGCAATGA AAGTTATTCG CGGTGGCGGT TATGAGTTTT CCGCAACAGA AAACTTAGTA TTCATGCGTG ATGGCGCTAC TAATAATGTA CGTATGGCAG ACATCGGATT CAGATTAGTC ATGAGCAAAA ATTAA
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Protein sequence | MNKFYIFSSP SLRAILQFSI ITSLLFVSLV GHVKSVEALI ESSADKVENK NKKQRVFSLP KPMLDELMKN MVLVEAGSFA MGSDSPLARN REKPVRQVSL DAFYIGKYEL TQDLFEQIMG WNNSFFACDK CPVNNISWFN MLLFIERLNS ATGKEFSLPT EAQWAYAAKG GNKSQNYRYS GSNNINDVAW FADNAKNKSH PVGLKKPNEL GLYDMTGNLW EFCLDDMSRQ AYTFTESHNP FMGDKENLKQ KAMKVIRGGG YEFSATENLV FMRDGATNNV RMADIGFRLV MSKN
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