| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2983 |
|---|
| Symbol | |
|---|
| ID | 3520535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 3122407 |
|---|
| End bp | 3123975 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637285436 |
|---|
| Product | putative arylsulfatase |
|---|
| Protein accession | YP_269683 |
|---|
| Protein GI | 71280072 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3119] Arylsulfatase A and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0960108 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATGA ATAATCGGCT TAAGAAGTTA GCACTAGGCA TAGGTGTACT TGCCATCGCC
ACCAGTGCAG CAGCAACAAC CAACAAAGCT AAGCCTAATG TACTAGCTAT TTGGGGTGAT
GATATTGGTT ATTACAATAT CAGTGCTTAT AACCAAGGCA TGATGGGTTA TCAAACACCA
AATATCGACC GTATTGCTGA TGAAGGCGCT TTGTTTACCC ATCATTATGC ACAACAAAGT
TGTACTGCTG GCCGTGCTTC TTTCATTTTA GGTCAAGAAC CCTTCAGAAC CGGTTTATTA
ACTATTGGTA TGCCAGGTTC AACACACGGT ATTCCCGATT GGACACCTAC CATTGCTGAT
CTTCTAAAAG AAAAAGGTTA CATGACTGCG CAATTTGGTA AAAACCATTT AGGTGATCAA
GATAAACACT TACCGACTAA TCATGGTTTT GATGAGTTTT TTGGTAATTT ATATCATTTG
AATGCCGAAG AAGAGCCTGA AACTTATTAT TATCCTAAAG ATAAAGAATT TCATAAAAAA
TATGGTCCTC GCGGTGTTAT CCATTCATTC GCTGATGGAA AAATAGAAAA TACAGGTTCT
ATGACGCGTA AACGCATGGA AACAGCTGAT GGAGAGTTTT TAGCGGGTAC CTTGAAGTTT
ATTGATAAAG CGCATAAAGC CAAAAAGCCT TTCTTTATCT GGCATAGCTC AACTCGTATG
CATGTATGGA CACGTTTGCA AGAAAAGTAT CGCGGTAAGT CAGGCGTAAG TTTAACGGCT
GATGGTATGT TAGAACATGA TGATCAAGTG GGTATATTAC TTGATAAATT AGACGATTTA
AAAATTGCAG ATAATACCAT TGTTATTTAT TCAACCGACA ATGGTGCAGA AAAATTTACT
TGGCCTGATG GTGGTACATC ACCATTTAGA GGCGAAAAAG GAACGACAAC AGAAGGCGGT
ATGCGTGTTC CTCAACTCGT TCGCTGGCCT GGTACAATCA AGGCAGGCAG TAAATTTAAT
AACATGATGT CACATGAAGA TTGGATGCCA ACACTATTAG CGGCAGCGGG TGAGCCAAAC
ATAGTTAACA AGCTTAAAAA AGGTTACAAA GCTAACGGTA AAAAATGGAA AATTCATCCT
GATGGTCATA ACTTCTTACC TTTCTTTAAA GGCCAAGAAA AAGCATCTCC GCGCACGAGT
AAATTATATT TCAATGCTGC CGGTGATTTG AATGCTGTAC GTTGGAATGA ATGGAAAATT
GCCTTTGCAG AAGAAGAAGG CGGAATTAGC ACTGCATACC GTAAAGTCCC TGCATGGCCT
ACCATTACCA ACTTACATGC AGATCCCTTT GAAACGGCTG CAAAAGAGTC AGGAATGTAC
TTACGTTGGT ATGCGGATAA CATGTGGTTA TTTGTCCCGG CACAACAACA AGTTGCACAG
TTCATGTCAA CTATTGACAA ATATCCTTTC CAAGAAGGTA GTAGTTTAAG TGCGAGTAAT
ATTGGTTATA AAAGCATTAG AACACAGGCT GCACTAAAAA AAATACAACA ACTAAGTCCT
AACCGATAA
|
|---|
| Protein sequence | MEMNNRLKKL ALGIGVLAIA TSAAATTNKA KPNVLAIWGD DIGYYNISAY NQGMMGYQTP
NIDRIADEGA LFTHHYAQQS CTAGRASFIL GQEPFRTGLL TIGMPGSTHG IPDWTPTIAD
LLKEKGYMTA QFGKNHLGDQ DKHLPTNHGF DEFFGNLYHL NAEEEPETYY YPKDKEFHKK
YGPRGVIHSF ADGKIENTGS MTRKRMETAD GEFLAGTLKF IDKAHKAKKP FFIWHSSTRM
HVWTRLQEKY RGKSGVSLTA DGMLEHDDQV GILLDKLDDL KIADNTIVIY STDNGAEKFT
WPDGGTSPFR GEKGTTTEGG MRVPQLVRWP GTIKAGSKFN NMMSHEDWMP TLLAAAGEPN
IVNKLKKGYK ANGKKWKIHP DGHNFLPFFK GQEKASPRTS KLYFNAAGDL NAVRWNEWKI
AFAEEEGGIS TAYRKVPAWP TITNLHADPF ETAAKESGMY LRWYADNMWL FVPAQQQVAQ
FMSTIDKYPF QEGSSLSASN IGYKSIRTQA ALKKIQQLSP NR
|
|---|
| |