| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2945 |
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| Symbol | |
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| ID | 3520230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3083918 |
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| End bp | 3086449 |
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| Gene Length | 2532 bp |
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| Protein Length | 843 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637285398 |
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| Product | putative DEAD/DEAH box helicase |
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| Protein accession | YP_269645 |
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| Protein GI | 71279769 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.579512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATC TAATTATTTC TTCATTGTTT TCAGGTACTG AGTTAAGGGA TTTACATCAT
ACGGTTGATA GTGTTATTAG CCATTATCCT GATAACCATT TTGCACAGAG ATTAAAAAAA
GTAGTTGATG GGGATAACAC GAGTTTATTG GACTTGCTTT TATCAATTAA AGATTACTTA
TATTCATCTC AAAAAGAGCT GGATAACCAG CACAATAACT TTCCAATACC TAGACGTTTA
TCTAGTGAAG AGGGAGTACT CTGCGCCAAA GCTATGCTGA ATTATCAAGT TGGTTCAAAC
TTCCTTACTT TATCAACTCC AGTAGTTAGT CAAAAGCTGA TGGATGTTTA CGAACAGAAA
CAAAAACGTA AAGTGAAAAA GGTAGAAATG GATTTAGCCT TAATTTCAAG GTTATCAGAC
CAAAACTATA GTCAGTATTC TAGTGCTGGG CAAAGGATGG CTGTGAGGGT TGCTTTAACA
TGCCCTCAAG ACTCTACTCT TTTTATTAAC TTACCTACTG GGTGCGGTAA AACATTAGTT
GCTCATGCCT GTATGTTATT TAGTAAAAGT AAAGCGCTTA CAATAGTTAT TGTTCCTACT
GTCGGTTTGG CTATAGAGCA AGGTAAAAGA GCGAAAGAAT TACTTGAAAA AGCGGATAGT
GATTCTGTTC AAAATTATGC TTGGCATGGA CAGTTGTCGG ATGGCGAAAA ATCTGAAATT
AGGGATAATA TTGACAATGA TAAGCAAAAA GTAATTTTTA CCTCTCCAGA ATCAGTTACT
GGAAGCCTAC TACCTTTATT ATTCCGATTA GCTAAGCAAA ACTCTATTGC GAATATCATA
ATTGATGAAG CGCATTTAAT TGACACATGG GGGAGCAATT TTCGCTCTGA ATTTCAACGT
TTTGGCGCTT TGGTTGCGTC TTTAAGGCAA GTAAGCAATT CACCTTTCAA AACGATACTT
ATGTCGGCAA CTTTCACTCA AAGCAATATA GGTTCTTTAA CAACTTTGTA CTGTGAATCC
GATAACAAAC CAATTGTTGT TAATGGTAAT TTTTTACGTC CAGAAATTAG TTCATCTTAT
AAGAATGAAG GTGAGAACAA CCACCTTCAA TCAGTTGTAG GGAGAGTGAT TGCTTTACCC
AAACCACTGA TTTTATATAC AACACTTGTT CAGGATTCTA TTGACTTAAG TTGTCATTTG
AAAGCTATAG GACTGAATCG AATTGCCCTG TTTAACGGTA AAACTGATAT ACGCTCAAGA
GAGAAGATAA TTGAGCAGTG GCAAAAAGAT GACTTAGATA TAATTATTGC CACCTCGGCC
TTTGGTGTTG GTATGGATAA GTCGAATGTG AAAAGTGTTA TTCATGCTTG TATTCCTGAT
AATATCGATC GTTATTATCA AGAGATTGGC CGAGCAGGTC GAGACGGTGA AGCAGCAACA
TCCGAAGTTA TTTATTATAA TAAACAATTA GCTAAAGCCA AAAAAATTAA TAGTGAAAGA
ATCATATCTA CAGAGTTAGG TTTCAAAAAG TGGAAAGGTA TGTGGGATAG GCGAGTTGAA
GTGTCTTCTC ATTCCGTTTT AAAAGGAGAT TTATATCTGT TAGATACTTC ATATTATCAT
GAGGGACTCA GCAACCAGAG TGATAGAAAT GAAGACTGGA ATTGGTTAAC ACTTTTGTTT
ATGCAGCGTG CAGGTTTAAT CCGAATTTTT TATGATGTGC CAGAAATTGA AGATGACAGT
GAATTAAATG ATTTTGAAAG GAATAGCCAA CGAAAAGAGT ATTGGAAGGG CTATAACAGC
AAGATTTTAG TTCTAATCCT TAATGAGCAA TGTCTCTCTA ATTTATATTG GGAAACCAAT
ATTCAAAAAC ACCGTAATAA AGAAAAGAAG ACTCAAGATA ATGGCTTTCT AACTTTATCT
GAGAATATAA CGTCTCTTGA ACAACCTATT TGTAAAGAGT TAGTGAAGTA TTACACTGTA
AATGGTAATA GTCCTCAAAG AGCATGCGGA GGTTGTGTAG CATGCGAAGG GTTTCTGCCG
ACAGTAGGAG ATGATGTCTC TGTTGATAAT TATAGTTCGT CACACTTACT GCCGAACACT
TTAAATGATT ACATCTCTTT TGATAATGTT TGCAGTGTTT ATTACGACAA ATCTCAGGAT
CTTACATCTG AGTTAAAATG GTCTGTATTC ATTAAATTAA TGCTTGATAG AAAGTACATT
TTTGCTGTCA AGGGAGATAT CGAATTCTTA AAAAGGCTAG CGGGAAAACA GAAAGGACTC
AAGTCTTTTA AACCATTTTG GATTTCTCAG AGTTATCTTG ATAATAGTAA TATTTGGCCA
TCTTTACATA TAAATTCATC TATTGGTTCC GAGGTGTTAA TTCCATCATT TGAGGATCAG
GCGACATTCT TTTTAGCTGA ATATAACCAA AAAACAAAAT CAAATAAATA CCGATTGTGG
TGGCAAGATA ATAATAAATC TATTCCATTA ACAAACTTCA TTAAAATAGT TGAGAAAAAC
ACGTGTCTGT AA
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| Protein sequence | MNNLIISSLF SGTELRDLHH TVDSVISHYP DNHFAQRLKK VVDGDNTSLL DLLLSIKDYL
YSSQKELDNQ HNNFPIPRRL SSEEGVLCAK AMLNYQVGSN FLTLSTPVVS QKLMDVYEQK
QKRKVKKVEM DLALISRLSD QNYSQYSSAG QRMAVRVALT CPQDSTLFIN LPTGCGKTLV
AHACMLFSKS KALTIVIVPT VGLAIEQGKR AKELLEKADS DSVQNYAWHG QLSDGEKSEI
RDNIDNDKQK VIFTSPESVT GSLLPLLFRL AKQNSIANII IDEAHLIDTW GSNFRSEFQR
FGALVASLRQ VSNSPFKTIL MSATFTQSNI GSLTTLYCES DNKPIVVNGN FLRPEISSSY
KNEGENNHLQ SVVGRVIALP KPLILYTTLV QDSIDLSCHL KAIGLNRIAL FNGKTDIRSR
EKIIEQWQKD DLDIIIATSA FGVGMDKSNV KSVIHACIPD NIDRYYQEIG RAGRDGEAAT
SEVIYYNKQL AKAKKINSER IISTELGFKK WKGMWDRRVE VSSHSVLKGD LYLLDTSYYH
EGLSNQSDRN EDWNWLTLLF MQRAGLIRIF YDVPEIEDDS ELNDFERNSQ RKEYWKGYNS
KILVLILNEQ CLSNLYWETN IQKHRNKEKK TQDNGFLTLS ENITSLEQPI CKELVKYYTV
NGNSPQRACG GCVACEGFLP TVGDDVSVDN YSSSHLLPNT LNDYISFDNV CSVYYDKSQD
LTSELKWSVF IKLMLDRKYI FAVKGDIEFL KRLAGKQKGL KSFKPFWISQ SYLDNSNIWP
SLHINSSIGS EVLIPSFEDQ ATFFLAEYNQ KTKSNKYRLW WQDNNKSIPL TNFIKIVEKN
TCL
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