| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2888 |
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| Symbol | |
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| ID | 3522714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3022964 |
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| End bp | 3024352 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637285341 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_269593 |
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| Protein GI | 71282241 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0238453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAA CTAATACTGT TACACCTAAT AAAAAACGAG TTAATCTACT CGAAGATCCT
GTTGCTAATA CTTTAAAGCG TATGACCATT CCAATGATAT ATGGCATGGT GCTTTTGATG
ACATTCAACT TAATAGATAC ATTTTTTGTT GGACTTCTCG GGACACAACC CCTCGCAGCT
ATCAGTTTCA CATTCCCTGT TACCTTCACT GTAATTAGTT TAACTATTGG TTTAGGTATA
GGAACCTCTG CAGTTATCGC TAAGTATTTA GGGAAAAAAG ATACAAAGTC TGCAAAAAAT
GCGGCAACAG CTGCATTGTA TTTAGCCGCA ATTATAGTTG CGTGTTTATC CACAGTGGGT
TATTTCATTA CCGATCCATT ATTTACTTTA CTTGGTGCCC AGCCATCTTT ATTGCCTTTA
ATTCATGAAT ATATGGATAT TTGGTATATC GGAAGTGTGT GTCTAATTGG TCCTATGATA
GGCAATGCAG TATTACGTGC ATCAGGAGAT ACTAAAACAC CCAGTATGAT AATGGGGAGT
GCCGGACTGA TTAACGCCAT ACTTGACCCT ATTTTTATTT TTGGATTCGG GCCAATCCCA
GCGATGGGTA TACAAGGTGC AGCAATTGCC ACATTAATTT CGTGGATTTT TGGTTTAGGT
TTCGTATTGT ACATTTTAAC TAAAAAGCAC GATCTTATTC ATACAACTAT GCTGCCTATA
AAAGAGCTGA TTGTTGCCTG TAAAGATATC TTAAAAATAG GTCTGCCTGC TGCAAGCGCA
AATATGTTAA CCCCCTTAGC TGCCGCAATT ATGACTGCAA TAGTGGCTTC TTATGGTGAA
GCAGCTGTAG CAGCCTTTGG TGTTGGCTCA AGACTTGAAT CAATAGCTTG TTTGATAGTA
CTAGCCTTAT CGATGACTTT ACCTCCATTT ATTAGCCAAA ATTTTGGAGC GGGTCAATTA
CATCGCGTCG AAACGGCTTA CAAAGTTGCA ATAAAGTTTA TCCTAGTCTG GCAAATAGTC
ATTTATATTA TATTAGCTCT ATGCGCAAAT TGGATCGCAA GTGTTTTTAC CAAAGAGACT
GAAGTTGCCG ATTTAATTAA ACTCTTTATT TGGATACTCC CACTAGGGTA TGGTTTACAA
GGCATTATCA TATTAACTAA CTCATCATTT AATGCTTTGC ATAAGCCAAT GATTGCTTTG
GGGTTAAGTG TCATACGATT ATTTGTTTGT TATTTACCAT TAGCCTATGT AGGTAGTTTG
TTTTACGGCT TAGCGGGTTT ATTTGCCGGT GCTTTGCTTG GCAATGTATT AATGGCCATG
ATTTCTTACC GATTATTTAG CAAAGAGTTT ATTCATAATG AGTCAGCTTC ACCGGAGCAA
GTGGTATGA
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| Protein sequence | MTKTNTVTPN KKRVNLLEDP VANTLKRMTI PMIYGMVLLM TFNLIDTFFV GLLGTQPLAA
ISFTFPVTFT VISLTIGLGI GTSAVIAKYL GKKDTKSAKN AATAALYLAA IIVACLSTVG
YFITDPLFTL LGAQPSLLPL IHEYMDIWYI GSVCLIGPMI GNAVLRASGD TKTPSMIMGS
AGLINAILDP IFIFGFGPIP AMGIQGAAIA TLISWIFGLG FVLYILTKKH DLIHTTMLPI
KELIVACKDI LKIGLPAASA NMLTPLAAAI MTAIVASYGE AAVAAFGVGS RLESIACLIV
LALSMTLPPF ISQNFGAGQL HRVETAYKVA IKFILVWQIV IYIILALCAN WIASVFTKET
EVADLIKLFI WILPLGYGLQ GIIILTNSSF NALHKPMIAL GLSVIRLFVC YLPLAYVGSL
FYGLAGLFAG ALLGNVLMAM ISYRLFSKEF IHNESASPEQ VV
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