Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2883 |
Symbol | |
ID | 3521327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3018684 |
End bp | 3019352 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637285336 |
Product | radical SAM domain-containing protein |
Protein accession | YP_269588 |
Protein GI | 71280858 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0602] Organic radical activating enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.470396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTATA AAATTAATGA GCTTTTTGAA ACCATTCAAG GGGAGGGCTC CTTCACGGGC CAGCCGTCAA TTTTCATTCG ACTACAAGGT TGTCCTGTCG GATGTTCGTG GTGTGATACT AAACATACTT GGGATATAGA ACTAGACGAC CAAGTCAGCC CTGACATTAT GTTAGCTAAA AAAGCTGAGA CTTCTCAGTG GGCTAATTTT TCGGCTGAAG ATATTCTAGC GTTAGTGAAG GAAAAGCATT TTAAAGCAAA GCATATTGTT ATCACTGGCG GTGAACCTTG TATGGTTGAC CTAACGCCAC TTTGTGAAAC CTTTGAAGAC CTAGGTTATA GCACGCAAAT TGAAACATCT GGTACCTTTG AAATTATTAC CACAGAAAAA TGCTGGGTAA CCGTATCTCC TAAAATCAAG ATGCGCGGTG GTTATGATAT TTTAGCAAGC GCTATGTCAC GTGCTAATGA AATAAAGCAC CCCGTTGCTA CAGAGCAAAA TGTAGATGAT TTAAAAGAGC TATTGGCAAT GCATCAGGTT GAAAATACCC CGGTATATCT ACAACCAATT AGCCAAAAGA AGCGCGCAAC CGAGTTAGCA ATAGCAACAT GTATAGCTAA CAATTGGCGC TTATCGGTGC AAGTTCACAA ATATATTGGT ATCGAATAA
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Protein sequence | MNYKINELFE TIQGEGSFTG QPSIFIRLQG CPVGCSWCDT KHTWDIELDD QVSPDIMLAK KAETSQWANF SAEDILALVK EKHFKAKHIV ITGGEPCMVD LTPLCETFED LGYSTQIETS GTFEIITTEK CWVTVSPKIK MRGGYDILAS AMSRANEIKH PVATEQNVDD LKELLAMHQV ENTPVYLQPI SQKKRATELA IATCIANNWR LSVQVHKYIG IE
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