| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2868 |
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| Symbol | |
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| ID | 3521291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2999452 |
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| End bp | 3000798 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637285321 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_269573 |
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| Protein GI | 71280822 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA TAATGACGAA TATTACCAGC AATAAAGTTT CTAAAAAAAT GAAACTCATT
ACTTTAAGCA GTTTATTTAT CGGCTTAGCT ATCGCTTCAA CCACTGCATT ATCATACAAG
GATGCCGCGC TAGTAAATGC GGCGTCGGTA GAGCAATCAA TCGAAATAAA AACTGACCAT
GATCATGACG CTGAAAGTGA AAACGTACTT GATAAAAGTG GTCATGAACA CGGTAGTGAT
GACAGCAAAG ACGATCATGC GACTGAGGAA AAATCTGATC ACGGTCATGA CCATGGTAGT
GAAACAGCAA CTAAAGCAAC GACTGAAGCA GAGCATGAAG AAGGCATAAG TTTTAGTCCT
GAAAAAATGG CACTCGCCAA TATCAAAGTG ACTAGCTTAA AGCCGGCAAT ATTCGCTAAA
AGTGTCTATG CACCAGGAGA AATAAAAGCG AACGGTTATA CCAGCTATAT TGTCTCCCCA
CGTACTGAAT CGGTAGTGAT CAGTCGTCAT GCCATTTTGG GTGAACATGT TACTAAGGGT
CAGGCTTTGG TTACATTATT TAGTGAATCA ATGGCTGAAG CACAAGCACA ATATCGTGTT
GCATACAGTG ATTGGCAGCG CACTAAAAAG TTGGGTCTTG GCACGGTTAG CGAAAGCCGT
CTGTTAGCCA GTGAAACAGA TTATATCTCT GCTTATGGTC GATTAACTGC CTTTGGTTTA
ACCAAAGCAG CCATTAAAGA TATTGTAAAA AACAACTCTT CAAACCTCGG CGAATATACC
TTAGTGGCTC AGCGTTCTGG TGTGGTCTTA AGTGATGATT TTTCTCAAGG GCAGCGCGTT
CCTGCAGGTG AAAAAATCAT GGTATTGGCA GATGAAAAAG ACTTGTGGGT TGAAGCGCGT
GTTTCGCCAA ATAAAAAGTT AAGTCTTCCT ATTGGCACCA TAGCAAAAGT TGAGTTTGCC
GGGCAAATAC ACGTGGCTAA GGTCATTCAA GAAGCCCATA CCATTGACCC AAGTACCCGT
ACCCGAATTG TAAGATTGTC TGTTGAAAAT ACTGACGACA GTTTGCATTC AGGCATGTTT
GTTAATGTTA ATTTTCAGTT TGATACCAAA AGTCCGGTAA TAGCAGTGCC AGAAACGGCA
TTAATGCGCG GTGCAGATGG TGATTGGACA GTATTTGTTG AAGACCACCC AGGTGAATTT
AAAGCGGTTG AAGTTGAATT AGGCCAGCCA TTAGGTAATT ACCGTCAAAT TATCGGTATC
GCGCCTAATA CCCGCGTGGT GACAAAAGGT GCATTTTTTG TTGCGTCAGA AATAGCAAAA
GGCGGATTTG ATCCGCATGG CCATTAG
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| Protein sequence | MKNIMTNITS NKVSKKMKLI TLSSLFIGLA IASTTALSYK DAALVNAASV EQSIEIKTDH
DHDAESENVL DKSGHEHGSD DSKDDHATEE KSDHGHDHGS ETATKATTEA EHEEGISFSP
EKMALANIKV TSLKPAIFAK SVYAPGEIKA NGYTSYIVSP RTESVVISRH AILGEHVTKG
QALVTLFSES MAEAQAQYRV AYSDWQRTKK LGLGTVSESR LLASETDYIS AYGRLTAFGL
TKAAIKDIVK NNSSNLGEYT LVAQRSGVVL SDDFSQGQRV PAGEKIMVLA DEKDLWVEAR
VSPNKKLSLP IGTIAKVEFA GQIHVAKVIQ EAHTIDPSTR TRIVRLSVEN TDDSLHSGMF
VNVNFQFDTK SPVIAVPETA LMRGADGDWT VFVEDHPGEF KAVEVELGQP LGNYRQIIGI
APNTRVVTKG AFFVASEIAK GGFDPHGH
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