Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2866 |
Symbol | |
ID | 3522317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 2995001 |
End bp | 2995843 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637285319 |
Product | hypothetical protein |
Protein accession | YP_269571 |
Protein GI | 71281845 |
COG category | [K] Transcription |
COG ID | [COG4271] Predicted nucleotide-binding protein containing TIR -like domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.756263 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAC CGAGAATATT CATAGGCTCC TCAGTAGAGA GTTTACCTAT AGCTGACGCA ATAGCTGAAA ATTTAGAGTT TGATGCTGAA GTTACTATAT GGCGTAGTGG TACATTTAAC TTATCAAGTA ATACGTTAGA TGATCTTATT TTAAAGTCTA AATCAGTAGA TTTTTCAGCT TTTATATTTT CTCCTGATGA CTTGGCTATT ATGCGGTCAA GGGAACAGTA TGTTGTACGA GATAATGTAC TCTTTGAGCT TGGTTTGTTT ATTGGTTCTA TCGGTAAAGA AAGATGCTTT ATTATAAAGC CTCGTGATGT AGAGCTACAT TTCCCAAGTG ATTTACTCGG TATAACGCCA ACAGATTATG ATCCCAATCG TTCCGATGAT AACTTAACAT CATCATTAAC CTATGCTTCA ACGCAAATAA AAAGGGAAAT GAATAATAAA GGTGTGTTCA AAGAGATTAG TACACCTAAA GTTCAAAAGC TTGATGTTAA TAATGTATTA AGTGACGTAT CAGAAAATGA TCTTATAATC TTGGGTTCAT TGCTAGAAAG TTACAATAAC GATGTCGAAG GCTGTATAAG CTGGGACTTA CCTAATAAAA TTCAACAGCA TATTCCGACA CCAACCCTAA ATCTTGCTGT AGTTAAACTG CAAAGAATTG GCTTAATTCA GAAAGAGAAT GGAAGCGACT TTAATGGCAA TGAATATTTT ACTTATCGTT TAACTGATTA TGGCGTCGAT ATTTGCTTAA AATATGAAGA CACCATTGCT AAATTGTTTG CTCCAATACC TCAACAAAGC TATGGGTATG TACAACAAGC ACCAAAAAAA TAG
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Protein sequence | MSKPRIFIGS SVESLPIADA IAENLEFDAE VTIWRSGTFN LSSNTLDDLI LKSKSVDFSA FIFSPDDLAI MRSREQYVVR DNVLFELGLF IGSIGKERCF IIKPRDVELH FPSDLLGITP TDYDPNRSDD NLTSSLTYAS TQIKREMNNK GVFKEISTPK VQKLDVNNVL SDVSENDLII LGSLLESYNN DVEGCISWDL PNKIQQHIPT PTLNLAVVKL QRIGLIQKEN GSDFNGNEYF TYRLTDYGVD ICLKYEDTIA KLFAPIPQQS YGYVQQAPKK
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