| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2854 |
|---|
| Symbol | |
|---|
| ID | 3520531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 2983983 |
|---|
| End bp | 2984711 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637285307 |
|---|
| Product | putative branched-chain amino acid transport protein AzlC |
|---|
| Protein accession | YP_269559 |
|---|
| Protein GI | 71280068 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
|---|
| TIGRFAM ID | [TIGR00346] 4-azaleucine resistance probable transporter AzlC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.608526 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGTA GAACAGCTAT TGCTGAGGGA TCTACCCCTA GTGATTTTAA AATTATGTAT
CAAGCCATCG TTGATATATT CCCGCTTTCA CTCGCTGTGG TGCCTTGGGG AATTCTGTGT
GGCTCATTAG CAATCACTGT CGGTTTAACC CCGTTACAAG CGCAACTTAT GTCATTGTTA
ATTTTTGCGG GCGCAGCTCA ACTTGCCGCA TTAACTATGA TGGGCGCAGT TGGTTCTTTA
TCTTCGATGT TTTCCTCAAC CTTTGTTATA AGTTCCAGAC ATTTGCTTTA TTCCGCTGTT
TTTCGAGAGC ATGTCAGAAA AAGCTCATTA GGTCTTCGTT GCAGTATTGC CTTTTTTCTT
ACCGATGAAA TGTTTGCGGT AACCTGTGCT TATATGGCGA AGCATAAAAA ATTTAGTGCT
GTTTACGCAC TCAGCTCTGG TATTACTTTT TATGTATTTT GGAACGTTGC AACTTTTACA
GGCATTGTTG CTGGCCAACA TATCCCAAAC CTTGAACATT TAGGGTTGGA ATTTGCGATA
GCGGCAACCT TCATTGCGAT AGTTATTCCG ACAATCAAGA ATAGATCGAC CTTGATATCC
GTTATCAGTA GTGGTGTAAG TGCGATTGTA CTTTCAATAT TTATGAAGGA ATATGCGCTC
ATCGCAGCCA CCTTTATAGG TATGTTTTGT GGCTATTTAA CAAAAGAAAA GAGTGTTATT
AATGAATGA
|
|---|
| Protein sequence | MPSRTAIAEG STPSDFKIMY QAIVDIFPLS LAVVPWGILC GSLAITVGLT PLQAQLMSLL
IFAGAAQLAA LTMMGAVGSL SSMFSSTFVI SSRHLLYSAV FREHVRKSSL GLRCSIAFFL
TDEMFAVTCA YMAKHKKFSA VYALSSGITF YVFWNVATFT GIVAGQHIPN LEHLGLEFAI
AATFIAIVIP TIKNRSTLIS VISSGVSAIV LSIFMKEYAL IAATFIGMFC GYLTKEKSVI
NE
|
|---|
| |