| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2839 |
|---|
| Symbol | metG |
|---|
| ID | 3521573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 2967769 |
|---|
| End bp | 2969910 |
|---|
| Gene Length | 2142 bp |
|---|
| Protein Length | 713 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637285292 |
|---|
| Product | methionyl-tRNA synthetase |
|---|
| Protein accession | YP_269544 |
|---|
| Protein GI | 71281104 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.776393 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACA CTACTTTATC TGAAGCTACA TCAAACACTG CATCGCATTC TTTAGCAGAA
AAGCGCAAAA TTCTAGTTAC TTGTGCCCTT CCTTATGCCA ATGGTTCTAT CCATTTAGGC
CATATGCTAG AGCATATTCA AACCGATATT TGGGTACGTT TTCAACGAAT GCGTGGACAT
GAAACGTATT TTGTCTGTGC TGATGATGCT CATGGCACGC CAATTATGCT TAAAGCGCAA
GAGCTTGGCA TAACACCAGA AGAAATGATC AATGGTGTAC GTGAAGAGCG TATTAAAGAA
TTTAGTGACT TCCATATTAG CTTTGATAAT TACCACACAA CGCATAGCGA TGAAAACAAA
GAATACTCTG AAAAAATTTA CAACGCTTTA CATGCGAAAG GTCATATTAA AACCCGCATT
ATTTCTCAGT TATATGATCC TGAAAAAGGC ATGTTCTTAG CTGATCGATT TGTTAAAGGT
ACTTGTCCGA AATGTAAAAG TGAAGATGAA AATGGCGATA GCTGTGACAA CTGTGGTGCG
ACTTATTCAC CAACAGAAGT GCTTAACCCA CGTTCAGCTA TTTCAGGTGC TACACCGATA
TTAAAAGATT CTGAACATTA CTTCTTTGAC TTGCCTGCTT TTGAAACCAT GTTATCAGAC
TGGATACGCA GTGGTGCATT GCAAGAAGAA GTAGCGAATA AACTGACTGA ATGGTTCGAA
CAAGGTTTAA AGCAGTGGGA TATTAGCCGT GACGCGCCTT ACTTTGGTTT TGAAATACCT
AATGCTCCAG GTAAATTTTT CTATGTTTGG TTAGATGCGC CTATTGGTTA TATGGGCAGT
TTTAAAAACC TATGTGATAA AGACTCTACT ATCGATTTTG ACAGCTTTTG GAATAAAAAT
TCAGACGCCG AGCTATATCA CTTTATCGGT AAAGACATTA TTAACTTTCA CAGCCTTTTT
TGGCCAGCCA TGTTAGAAGG CGCTGATTTC CGCAAGCCTA CGGCTGTTTT CGCTCATGGT
TTTGTTACCG TGAACGGAGA AAAAATGTCT AAATCTAAAG GGACTTTCAT CAAAGGTCGT
ACTTACTTAG ATCATTTAAA CCCAGAATAT TTACGTTATT ACTACGCGAC TAAATTAACA
CACAAAATTG ATGACTTAGA TTTAAATCTT GAAGACTTCG TACAACGTGT TAATTCTGAT
TTAGTGGGTA AAGTGGTTAA TATCGCTTCT CGCTGTGCCA GTTTTATCAC CAAACGTTTT
GATGGCATGT TATCAACGAA CATTGATGAT CAAGCACTAG CGGATGAAGT AATGGCTGCG
GGTGATAGTA TTGCTGCTCA TTATGAATCA CGTGATTTCG GCCGTGGTAT GCGCGAAATA
ATGGCGCTTG CTGATAAAGT AAATGAATAT ATTGCTATAA AAGAACCATG GCAGCTTGTT
AAAGACGAAA CTAAGCAACA AGAAGTGCAA GACATTTGTT CATTAGGTAT CAACATGTTC
CGCACGCTAA TGATTTATTT GAAACCTGTA CTACCTGTAC TTGCAGATAG CACCGCTGCT
TTCTTAAATG ACGAGCTTGT TTGGGAAGGA CACAAAACCT TATTAACTGA CCATAAAATC
AATAAGTTCA AAGCGTTATT ACAACGTGTT GATATGGATA AAGTTAATGC GATGACTGAT
GCTTCAAAAG ATAGCTTAGG CGCACCAGTA GAAGAAGAGA AAAAGCCAGC TAAGAAAAAG
AAAGCCGCTA AAGTAGTTGA TAATTCAGCT GCTCTTGCTG ATCCTTTAGC TGCAGACCCA
ATTTCTGAAG AAATTGAGTT TGATGATTTT GCCAAAATTG ATTTACGAAT CGTTAAAATC
ATTAATGCTG AACATGTTGA AAAGGCTGAT AAATTAATAC AGCTAACTTT AGCGCTTAAT
GAAGAAGGCA CAGAAACTCG TCAAGTTTTC GCGGGTATTA AGTCAGCTTA CAACCCTGAA
GATTTAATCG GCAAGCATAC GGTCATGGTT GCTAACTTAG CGCCACGTAA AATGCGTTTT
GGTATGTCAG AAGGAATGGT ACTTGCTGCT GGTCCTGGTG ATAAAGACTT ATGGATATTA
AATCCAGATG ATGGCGCTAA AGCCGGTATG CGTGTTAAGT AA
|
|---|
| Protein sequence | MSDTTLSEAT SNTASHSLAE KRKILVTCAL PYANGSIHLG HMLEHIQTDI WVRFQRMRGH
ETYFVCADDA HGTPIMLKAQ ELGITPEEMI NGVREERIKE FSDFHISFDN YHTTHSDENK
EYSEKIYNAL HAKGHIKTRI ISQLYDPEKG MFLADRFVKG TCPKCKSEDE NGDSCDNCGA
TYSPTEVLNP RSAISGATPI LKDSEHYFFD LPAFETMLSD WIRSGALQEE VANKLTEWFE
QGLKQWDISR DAPYFGFEIP NAPGKFFYVW LDAPIGYMGS FKNLCDKDST IDFDSFWNKN
SDAELYHFIG KDIINFHSLF WPAMLEGADF RKPTAVFAHG FVTVNGEKMS KSKGTFIKGR
TYLDHLNPEY LRYYYATKLT HKIDDLDLNL EDFVQRVNSD LVGKVVNIAS RCASFITKRF
DGMLSTNIDD QALADEVMAA GDSIAAHYES RDFGRGMREI MALADKVNEY IAIKEPWQLV
KDETKQQEVQ DICSLGINMF RTLMIYLKPV LPVLADSTAA FLNDELVWEG HKTLLTDHKI
NKFKALLQRV DMDKVNAMTD ASKDSLGAPV EEEKKPAKKK KAAKVVDNSA ALADPLAADP
ISEEIEFDDF AKIDLRIVKI INAEHVEKAD KLIQLTLALN EEGTETRQVF AGIKSAYNPE
DLIGKHTVMV ANLAPRKMRF GMSEGMVLAA GPGDKDLWIL NPDDGAKAGM RVK
|
|---|
| |