Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2813 |
Symbol | |
ID | 3521525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 2944897 |
End bp | 2945373 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637285266 |
Product | hypothetical protein |
Protein accession | YP_269525 |
Protein GI | 71281056 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1956] GAF domain-containing protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0853777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAATC AAGCTGAATT TTATCATGAA CTATTAGGGC AAACTAAAGC GCTAATAAAC GATGAATCTG ATATTATTGC AAACATGGCA AATATCAGTG CTTTGCTGTT TGAGCGATTA GCTGATGTAA ATTGGGTTGG CTTTTATCGT CTTATTGATG GTGAATTGGT GCTTGGCCCT TTTCAAGGTA AAGTCGCTTG TATTCGAATT CCTGTCGGTA AAGGCGTTTG TGGTACTTGT TCTTTTACAG GAGAAGTTCA GCGTATTTCA GATGTTCATC AGTTTGATGG TCATATTGCT TGTGATGCAA GTAGTAATGC TGAACTAGTT GTTCCTGTTA AAATCGCTGG TAAAGTGATT GCTATTTTAG ACATTGATAG CACAGTGTTT GATCGATTCA ACCTAGAAGA CGAACAAGGC ATTGTGTCGA TAGTACAGGC TTTCGAGCAA AATATTACTG CTATGGACAA TGCGTAA
|
Protein sequence | MSNQAEFYHE LLGQTKALIN DESDIIANMA NISALLFERL ADVNWVGFYR LIDGELVLGP FQGKVACIRI PVGKGVCGTC SFTGEVQRIS DVHQFDGHIA CDASSNAELV VPVKIAGKVI AILDIDSTVF DRFNLEDEQG IVSIVQAFEQ NITAMDNA
|
| |