Gene CPS_2810 details

Gene Information

• Locus tag: CPS_2810
• Symbol: prc
• ID: 3518874
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 2941653
• End bp: 2943704
• Gene Length: 2052 bp
• Protein Length: 683 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637285263
• Product: carboxy-terminal protease
• Protein accession: YP_269522
• Protein GI: 71278501
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0793] Periplasmic protease
• TIGRFAM ID: [TIGR00225] C-terminal peptidase (prc)

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0215017
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAAAAT TTTGTCGTAT CGCTCTCGCC GTATCTTTAT CGTTAGGTTT ATCTGTAAGC 
GCTATTGCGT TTGAAAAACC AATCACTCCA GAAGAACTCC CTGTACTCAT GCCTGAATCT 
CAGCATGCTA CAGCAAGCAA GCGCATTACG GCACGATTCA CTCGTGCGCA TTATAAGAAA 
GTCATCATTG ATGATGCTCT ATCAGGTGAA GTTTTTGATC GTTTTATTAA ACAACTCGAT 
TATGCGAGAA ATATTTTCTT AGCAACTGAT ATTGATGATT TTCAGAAATA TCGTCTTGAA 
TTCGACACTG TATTGACACG TGGTAAGTTG GCAACCGCTT ACGATATTTA TAACCTAAAT 
ATGCAAAGAC GTTTAGAACG TTATGAATAT GCAGTCAGTT TATTAAATAG TAAAGGCGAT 
AAAAACCCTT TCAATTTCAC CAAAGAAGAA ATTTATTCTT TTGATCGTGA AGAAGCACCT 
TGGCCTGTTA GTGAAGCTGA GTTGAATGAA TTATGGCGGT TAAAGGTTAA ATCAGATGTT 
TTAAACCTGA CATTAACCAA GAAAGAATGG CCAAAAATTA AAGAAGTATT AACTAAACGC 
TATGAGTACG CGATTAAACG TTTAAAGCAA AGTGAAAGTG AAGATGCTTT CCAACTTGTA 
ATGAATAGCT TTGCTCGTGT TGTTGAGCCA CATACTTCAT ATTTATCGCC GCGAAATGCA 
GAACGATTCC AAGTTGATAT GAACTTGTCA CTTGAGGGTA TTGGTGCAGA GTTACGTTCA 
ATTGAAGATT ATACTGTTAT TCACCGTGTT GTTACGGGTG GACCGGCAGA TAAGTCTAAA 
CAATTAAAAT CAAAAGACCG TATTGTGGGC GTTGCCCAAG GCGATAAAGA TTTTGAAGAT 
GTTATCGGTT GGCGCTTAGA TGATGTGGTC GAATTAATTA AAGGTGCTAA AGGCACTACA 
GTTCGCTTAC AAATATTATC AGGTGATAGT GACGATGAAG CCAATATTAA AGTGGTTTCT 
ATCGTTAGAG ATATTATCAA ATTAGAAGAT AGAGCCGCAA AGTCAGAGGT TTATCTTGAA 
AATCCAGATG TGGCAGACAG TAAAAAATTA GGTGTTATTA CTATACCTAG CTTTTACAAC 
AACCTATCTA AAGATGTAAA AAAAGAAATA GCCAAACTTA AAGAGCAGGA AGTTGAGGGC 
ATCATTGTTG ACCTTCGCGG TAACGGCGGC GGCTCATTGA GCGAAGCGAC TTTATTAACA 
GGTTTGTTTA TCGATAAAGG TCCTGTTGTT CAAATTAGAG ATGGCGCAAA TCGTATTCAA 
GTAAATAGTG ATCGCGATGG TGTTAGCTTT TTTGATGGTC CCCTAACTGT AATGGTTGAT 
CGCTACAGTG CTTCAGCCTC TGAAATATTC TCTGCTGCCA TTCAAGATTA TGGTCGTGGT 
GTCATTATTG GTGAACATAC TTTTGGTAAA GGTACAGTGC AACAACACCG AGGTTTAGGT 
CGCGTATATG ACTTATATGA AAAGCCTTTA GGAAGCATTC AATATACTAT TGCTAAATTT 
TATCGTATAA ATGGCGGTAG TACACAGCAT AGAGGTGTAC TACCTGACAT CTCTTTCCCT 
GCTGCGGTAA ACCCAGAAGA TTGGGGCGAA AGTAAAGAAG AAAACGCACT ACCTTGGGAT 
CAAATTCAAA AAGCCAAATA TTCGCCGTTG AATGAACTCA ATACAGATAT TGAATACCTG 
AGTTCTCTTT ATCAGCAACG TATTAAAGAA AATCCAGAGT TTAATTACTT ATTGGAAGAT 
ATTAGTATTT ATCAAGCGGA AAAAGATGAT AAAACTATTT CATTAAACCT TGCAACACGT 
AAATCTGAGC GTGAAGAACG TAAAAGTAAA CGTTTAGTAC GTGTTAATGA ACAACTTGTG 
CTTTTAGGTA AAGAGAAAGT AACCGATTTA GATGATTTAT CTGATGAACT TGATGATTTA 
GACCCATTTT TAGATGAGGC AGCTCGGATA ACATTTGATT TTGTATCTTT AGGTAAAATC 
GCAAAAAAAT AA 

 

Protein sequence

MQKFCRIALA VSLSLGLSVS AIAFEKPITP EELPVLMPES QHATASKRIT ARFTRAHYKK 
VIIDDALSGE VFDRFIKQLD YARNIFLATD IDDFQKYRLE FDTVLTRGKL ATAYDIYNLN 
MQRRLERYEY AVSLLNSKGD KNPFNFTKEE IYSFDREEAP WPVSEAELNE LWRLKVKSDV 
LNLTLTKKEW PKIKEVLTKR YEYAIKRLKQ SESEDAFQLV MNSFARVVEP HTSYLSPRNA 
ERFQVDMNLS LEGIGAELRS IEDYTVIHRV VTGGPADKSK QLKSKDRIVG VAQGDKDFED 
VIGWRLDDVV ELIKGAKGTT VRLQILSGDS DDEANIKVVS IVRDIIKLED RAAKSEVYLE 
NPDVADSKKL GVITIPSFYN NLSKDVKKEI AKLKEQEVEG IIVDLRGNGG GSLSEATLLT 
GLFIDKGPVV QIRDGANRIQ VNSDRDGVSF FDGPLTVMVD RYSASASEIF SAAIQDYGRG 
VIIGEHTFGK GTVQQHRGLG RVYDLYEKPL GSIQYTIAKF YRINGGSTQH RGVLPDISFP 
AAVNPEDWGE SKEENALPWD QIQKAKYSPL NELNTDIEYL SSLYQQRIKE NPEFNYLLED 
ISIYQAEKDD KTISLNLATR KSEREERKSK RLVRVNEQLV LLGKEKVTDL DDLSDELDDL 
DPFLDEAARI TFDFVSLGKI AKK