Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2809 |
Symbol | nhaC2 |
ID | 3520912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 2940079 |
End bp | 2941557 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637285262 |
Product | Na+/H+ antiporter NhaC |
Protein accession | YP_269521 |
Protein GI | 71280446 |
COG category | [C] Energy production and conversion |
COG ID | [COG1757] Na+/H+ antiporter |
TIGRFAM ID | [TIGR00931] Na+/H+ antiporter NhaC |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0607804 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAGT TAAATCTCCC AAAACAACCA AGTATGCTCG ATGCAAGCAT TCCAGTGATC ACTTTAATTT GTTTACTTAC CCTCGCCGTA TTTTATTTTG GTGACAACTC GTCTTATGGC CCGAATCAAA TAGCACTACT TATATCCATG GGCGTTGCTA TTATTGTCGG CGTAAAAAAT GGGCACAACT GGCACTCTAT TGAAAAAGCC ATTGTAAATG GCATTTCTCT TTCCCTTGGT GCGGTTTTAA TCTTATTAGC CGTAGGCTCG CTGATTGGTA CTTGGTTATT ATCGGGTACC GTACCAACAA TGATTTATTA TGGATTACAG TTATTAAATC CATCATGGTT TTATGCTGCG GCCTGTGTAA TGTGTGCGAT CGTCTCTATG AGTATTGGTA GTTCATGGAC TACTGCAGCT ACAATCGGTG TTGCTTTAAT TGGTATAGCT CAGGGATTAG ATTTATCTCC GGCTGTTACT GCAGGTGCTG TTATTTCTGG TGCTTACTTT GGTGATAAAA TTTCTCCACT TTCAGAGACA ACAAATTTAG CTCCGGCTAT CGCAGGTAGT GAACTTTTTG CTCATATCCG TTATATGTTT TGGACAACCG CGCCTTCTAT TGTTACGGCG CTAGTCTTGT TCATCATTAT TGGGCTTAAT GAAACTATCA CAGTAAATAA TGACAGTATT GATTTGTTAA GCCAGCAGTT AGCAGAACAA TTTAATATTT CGGTCTTTAA TTTAGTGCCA CTCTTGGTTT TATTAACGCT GGCCATTAAA AAAGTACCTG CCTTTCCCGC AGTTGCAATT GGTGCTTTGA TTGGTGGCGT TTGGGCATTG GTATTTCAAC AAGAGTTAAT CGTACGTTTA GGCGGAAATA CCGATTTGAT TACAGCAAAT GTAAAAGTGA TCTGGACGGC GTTTTTTGAC GGGGTAGTGA TTGAAACAGG CAACAGCCAG CTAGACTCAT TACTCAGTGG AGGTGGTATG TCTTCTATGT TAAATACTGT TTGGCTTATC ATGTGTGCGT TAAGTTTTGG TGCGGTATTA GAGCACTTAG GTATGTTGAA AAAGTTTGTT GAGGTTATTT TAGCTTCAGC TAAATCAACC GGTAGTCTTA TCGCGAGTAC TGTGGCTACG TGTATCGGCA CTAACATTTT AACCGCGGAT CAATATATGG CTATTGTAAT GCCTGGTCGT ATGTATAAAG AAGAATACGA GCGAAGAGGT TTAGATCCCT TGGTGTTAAG CCGTACTCTG GAAGATGCAG GTACCATTAC TTCACCACTA ATCCCATGGA ATACTTGTGC CGTTTATATG TCAGGGGTGT TATTAGTTAA CCCACTTGAT TATATGTTTT ATTGTTTCTT TAACTGGATT AATCCCATCC TTGCTGTTAT TTATGGCTTT ATTGGTTTTA ATATTAAGAC ATTAACTAAT AAAACGACTA AAGAAACAAC TCATAAAGCA ACAGCTTAA
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Protein sequence | MSELNLPKQP SMLDASIPVI TLICLLTLAV FYFGDNSSYG PNQIALLISM GVAIIVGVKN GHNWHSIEKA IVNGISLSLG AVLILLAVGS LIGTWLLSGT VPTMIYYGLQ LLNPSWFYAA ACVMCAIVSM SIGSSWTTAA TIGVALIGIA QGLDLSPAVT AGAVISGAYF GDKISPLSET TNLAPAIAGS ELFAHIRYMF WTTAPSIVTA LVLFIIIGLN ETITVNNDSI DLLSQQLAEQ FNISVFNLVP LLVLLTLAIK KVPAFPAVAI GALIGGVWAL VFQQELIVRL GGNTDLITAN VKVIWTAFFD GVVIETGNSQ LDSLLSGGGM SSMLNTVWLI MCALSFGAVL EHLGMLKKFV EVILASAKST GSLIASTVAT CIGTNILTAD QYMAIVMPGR MYKEEYERRG LDPLVLSRTL EDAGTITSPL IPWNTCAVYM SGVLLVNPLD YMFYCFFNWI NPILAVIYGF IGFNIKTLTN KTTKETTHKA TA
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