| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2804 |
|---|
| Symbol | |
|---|
| ID | 3518766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 2932107 |
|---|
| End bp | 2933141 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637285257 |
|---|
| Product | BNR repeat-containing protein |
|---|
| Protein accession | YP_269516 |
|---|
| Protein GI | 71278627 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.354775 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTAT TAGTTGCTTT TGCAGTTATA TATTTTATCT CGATTTCTCC TGTTTGTGCT
GAAAATACAG CGTCAACTAT CAATATCCCA ACTCCAGCAA TAGAGTCTCC ATTAGCAAGT
AAGTCATTAT TATTAGACAT TTCACTTATT GGTCAAGAAA AGCTAGTAAC GGTCGGACAG
CATGGCCATA TATTACTTTC TAACGACGGT AAAAAATGGC AACAAGCCAA TGTACCTGTA
CAAGTTACAT TAACCAATGT GTTCTTTTTA AATGAACAGT TAGGTTGGGC TGTTGGTCAT
GACGCAACGA TATTGCACAG CCAAGATGGT GGGCTCAATT GGCAAGTTCA ACAATATTTA
CCTTTACTAG AAAAACCCCT TTTTGATATT TATTTTAAAA ACCCTCAGCA GGGAATTGCT
GTTGGTGCTT ATGGCCAGGT ATTTCGCACC AATGATGGTG GTAGCACTTG GCAAAACGAA
TTTCATCAAG AGATTTTGTT AGCTGATGAT GTTGAATACC TTAATGAATT AAAGGCTGAA
GATGAAGCCG CTTATCTAGA CGAGATTACC TTCATTTTGC CGCACTTTAA TCGTTTGGTT
CAAGACGGTG GCAGTTTATT TCTATTAGGT GAAACAGGGT TATTGGCAAA AAGTGATGAC
TTTGGCCTGA CCTGGCAACA ATTTGATAAC TTTTATCAAG GTTCTTTTTT CTCATTGGCG
CGAACGAAAA CGGGTAATGT TTTAGTCGCA GGCCTTCGTG GCCATGTTTT TCGTAGCCTC
AATCATGGTT CGCAGTGGGA TGAAGTTCCC ACCAATACCA CTGCATTATT AAATGATATT
GTTTTTGCTA ATGATGAGCG AATTTTCATT CTAGGAAACA ATGGTATGTT GCTTATTAGC
ACCGACGATG GTGAAAGTTT TAGCAAAATA CCTCAGCAAG ATGGAAAAAC GTTAATCGCG
GGTGTGTGGT TTAAAGGTCA GTTAATTGCA GTCTCTGATG TTGGTATTAA GGTAGTTGAT
TTATCTCAAG AATAA
|
|---|
| Protein sequence | MRLLVAFAVI YFISISPVCA ENTASTINIP TPAIESPLAS KSLLLDISLI GQEKLVTVGQ
HGHILLSNDG KKWQQANVPV QVTLTNVFFL NEQLGWAVGH DATILHSQDG GLNWQVQQYL
PLLEKPLFDI YFKNPQQGIA VGAYGQVFRT NDGGSTWQNE FHQEILLADD VEYLNELKAE
DEAAYLDEIT FILPHFNRLV QDGGSLFLLG ETGLLAKSDD FGLTWQQFDN FYQGSFFSLA
RTKTGNVLVA GLRGHVFRSL NHGSQWDEVP TNTTALLNDI VFANDERIFI LGNNGMLLIS
TDDGESFSKI PQQDGKTLIA GVWFKGQLIA VSDVGIKVVD LSQE
|
|---|
| |