| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2790 |
|---|
| Symbol | |
|---|
| ID | 3522286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 2911186 |
|---|
| End bp | 2911740 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637285243 |
|---|
| Product | putative electron transfer protein |
|---|
| Protein accession | YP_269502 |
|---|
| Protein GI | 71281814 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA CACTCGCTTT GGTTTTATTT TTAATAGCTT TTACTGCTTC TGCCACTGCA
GCAGAACAAG TGGATAGTCC TCAACAGTCC CTAGAACAGG CGTTGCTAAA GCAAGAAGGT
AAGGTGGTAT ATATTGATTT TTGGGCATCA TGGTGTGGCC CTTGTGTTAA ATCATTTCCT
TGGATGAATA AAATTCAGCA GCAATTCAAG GAACAAGGTT TCACTGTAAT CAGTATAAAT
TTGGATGCCG ATGAAACGAA CGCCCAACAA TTTCTACAAG ATAATCCAGC GTCATTTGCT
GTTATTTATG ATCCTAAAGG CACTATAGCT AAACATTTTT CTATTCAAGG CATGCCAACA
AGCATGTTAA TAAACCGTGA TGGCGTGATT AAATATCGTC ACAGTGGTTT TTTTACCGGT
AAAATAAATC AATATGAAGA TGAGATTAAA CGGTTACTCA ACTCATCATC ACCCACTCTT
TCTAAAGATA TTCCTAACAA GACTCATAAC ATGGCTCATA ACAAGACAAA GCGAGACAAT
CATGAAAGCG AATAA
|
|---|
| Protein sequence | MKKTLALVLF LIAFTASATA AEQVDSPQQS LEQALLKQEG KVVYIDFWAS WCGPCVKSFP
WMNKIQQQFK EQGFTVISIN LDADETNAQQ FLQDNPASFA VIYDPKGTIA KHFSIQGMPT
SMLINRDGVI KYRHSGFFTG KINQYEDEIK RLLNSSSPTL SKDIPNKTHN MAHNKTKRDN
HESE
|
|---|
| |