Gene CPS_2779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_2779 
SymbolaroG 
ID3522641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp2900947 
End bp2902005 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content39% 
IMG OID637285232 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_269491 
Protein GI71282168 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCAAA CTGACGATGT ACGCATCAAT AAAATTAAAG ATCTTTTACC TCCAATTGCT 
TTATTGGAAC GATTTCCTGC GTCAGAGCAA GCAACTAAAT CAGTCGTTGC TGGCAGAACT
GCTATTCACA ATATTCTCAA AGGTAAAGAT GATCGCTTAT TAGTGGTTAT TGGACCTTGT
TCTATACATG ATCCTGAAGC GGCACTTGAA TACGGGCAAC GCTTAGTAAA GCTTCGTGAA
GAGTACAAAG ATAGTCTTGA GATTGTCATG CGTGTTTATT TTGAAAAACC ACGTACTACC
GTTGGTTGGA AGGGCTTAAT TAATGACCCT TATATGGATA ACAGCTTTAA ATTGAATGAT
GGTTTACGTT TAGGTCGTAA GTTACTAGTA GAACTAAATG ACCTTGGTTT ACCTACGGCG
GGCGAGTTCT TAGATATGAT CACACCGCAA TATATGGCAG ATCTTATGTG TTGGGGAGCC
ATTGGCGCTC GTACTACTGA ATCACAAGTT CACCGTGAAT TAGCATCAGG ACTTTCATGT
CCAGTTGGAT TTAAAAACGG AACTGACGGT ACCATTAAAA TTGCGATTGA TGCCATAGGC
TCAGCTTCTG CATCACATCA CTTTTTATCA GTTACAAAAT TTGGCCATGC TGCCATTGTT
GAAACGACAG GTAATAGTGA TTGTCATATC ATTTTACGTG GTGGGAGAAC GACTAATTTT
GATGCTGATA GTGTTAAAGC GGTAACCGAG CAATTAACTA CCTCTGATTT AAACACTAAG
GTAATGATTG ATTTTAGCCA TGCTAACTCG AGCAAAAAAT TTGAAAATCA AATGATAGTC
TCTACTGATG TCAGTGAGCA AATTAGCCAA GGCAATGAAA ATATCTTTGG TGTTATGGTT
GAAAGTCATT TAGTTGAAGG TAATCAAAGT CTAGTTAAAG GTAGAGCAGC CGTGTATGGA
CAAAGTATTA CTGATGCTTG TATTGGCTGG GATGATACTG AAAAATTATT AAGCCAGTTA
AATGGAGCCG TTGTTAGTCG CCGAAGCGTT ATAGACTAA
 
Protein sequence
MYQTDDVRIN KIKDLLPPIA LLERFPASEQ ATKSVVAGRT AIHNILKGKD DRLLVVIGPC 
SIHDPEAALE YGQRLVKLRE EYKDSLEIVM RVYFEKPRTT VGWKGLINDP YMDNSFKLND
GLRLGRKLLV ELNDLGLPTA GEFLDMITPQ YMADLMCWGA IGARTTESQV HRELASGLSC
PVGFKNGTDG TIKIAIDAIG SASASHHFLS VTKFGHAAIV ETTGNSDCHI ILRGGRTTNF
DADSVKAVTE QLTTSDLNTK VMIDFSHANS SKKFENQMIV STDVSEQISQ GNENIFGVMV
ESHLVEGNQS LVKGRAAVYG QSITDACIGW DDTEKLLSQL NGAVVSRRSV ID