Gene CPS_2769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_2769 
SymbolrecC 
ID3519224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp2887100 
End bp2890696 
Gene Length3597 bp 
Protein Length1198 aa 
Translation table11 
GC content40% 
IMG OID637285222 
Productexodeoxyribonuclease V, gamma subunit 
Protein accessionYP_269481 
Protein GI71279256 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCCATC TTTATCCTGC CAACAAAATG GAAAACTTGT TGCTCTTGCT CAACAAAATT 
TCCCAGCTTT CCCCTCTAGG TGTATTTAAT CAAGAAGTCA TTGTGGTACA AAATGCAGGT
ATGCAGCATT GGCTTAATTT AGCCATTGCA CAAGAACGCG GTATTAGCAT GAATATGCGT
TACGCGTTAC CAGCTCAGTT TCTATGGAAG CTAATAAGGT CGCTGGCTAG TGATGAGAAG
GTGCCTGAAC AGTCACCTTA TTCAAGGGAG GTGCTTTGTT GGCGTATACA TGCACTGTTA
GCGCTAGATT CTGTAGTAGA AGATGATGAT TTTAGTCAAG CTACGCACTA TTGGCGTGGC
GAAAATACGA CAGACGAAGA GGATAATAAT ACAGTTAATG ATAGCAAACA TGCACAGCTA
AAACGGTATC AGTTAGCCAC ACAATTGGCC GATTTATATG AGCAGTATTT GATTTTCAGA
CCGCAGTGGT TAGACAATTG GCAACAAGGA AATTTTGAAC TAGACGGCTT AGAAAAAATA
TCAGCCAGTG AGCATAAATG GCAAGGCAAG CTGTGGCGAT TATTAATTGC CCAATTACCT
TATAATCCTG TTGAATTAAT GCATGATGCT ATTGCTAACA TTCAGGACAA AAAAGAGCTT
ATTCCACCGC GTATTAGTTT TTTTGGTCTT AATACCATGG CACCAATGTG GTTGAATTTT
ATTAATGCCC TAAGTGAGCA TGTTGAAGTA CATTTCTTTC ATCTTAACCC GTGTTTCTCG
TATTGGGGCG ATGTCGTTAC TGAAAAATAC GCCTTAAATA AGTTATCACA ATGGTCTGAT
GGCGTTTTAC CCGAGGAATT GGATGTACAT AGCTATGTCG GTAATCCGTT ATTAGCCAAC
TTGGGCCAGC AGGGGCGCGA GTTTATCTCA ATGTTACAAG ATTACAGTAC CATCGATGTT
GAGTTATTTG AGCAAGCTAA AAGTGCCCAA GCAATAAGTA ATAATAACGA CGTAACGAGT
GTTTTACATC AGCTGCAAAA CGATATTCTT GAACTGTCTG ATGCAAGATC TCCCGATGAT
GAAGCCATCA CTCCCAAAGC AGTACAACAT GATGATTCAA TTGTGATCAC CAGTTGTCAT
AGCGCATTAC GGGAAGTCCA AGCACTACAT GACTATTTAT TGCATCAATT TAATCAAGAC
AAAAGCTTAA CACCTAAAGA TATCTTGGTT ATGTGTCCAC AAATAGAACA ATATGCCCCC
TATGTAAATG CCGTATTTAC CCGTGGTTGG CAAGACATAG CAGGTGAAGT GCCGCCACTA
CCTTGTTCTA TTGCTGATCG CAGTGCTAAA GATAGTGACC CGCTAGTAGC CGCTTTTACT
GAATTACTGA CATTGCCGGA TAGCCGCTTT GGTGTCTCAC AATTGTTATC TTTTTTACGT
TTACCTGCCA TGGCTAATAA CTTTTCGATT AACGGCGAAG ACTTAGCTAA AATTTCTGCT
TGGCTTGAAC AAGCCACGGT ACACTGGGGA TTAGACTTAA CCCACAAACA ATCATTGTTA
GGGCAACAAG CAAACGCTTC ATTTACTTGG CAACAAGGCT TGTCACGTTT ACTTCGTGGT
TTTGCTTATG CCGACAGCGA ACAAATTTAT CAACAACAAC TGTTATTGAG TAATGTTGAA
GGTAGTGACA GCATCTTACT CGGTCAGTTA ATGTTATTTA TCGAACAATT ACATTACTTT
AGTGAAAATC TGCAAAGATC TCGCACCGCG ATACAATGGC AAACTTTTTT ACTTGAACAA
TTAAGCCATT TATTTAGCCG AGTCGATGCC GACAACGTCA GTAATGAAAA TAGCCTGATG
GTGATTGAGC AAGCAATTGC AGGCCTGGTC GAACATTGTC ACCACGCTCA TTTTGAAGAT
GATATATCAC TATTAATTGT GGTTGATTAT TTAAGCCAAC ATTTTAGCCA AGGTGATGCC
AGTAAGCAGT TTATGGTCGG GCAGGTAACC TTTTGCTCTA TGTTACCTAT GCGTAGTATT
CCGTTTAAGG TAATCGCGGT TTTGGGGTTG AATGATGGAG AATTCCCTAG ACAACGACAA
GCCTTAGGTT TTGATCTTAT GTCGTTGTCA AAAGCTAAAT TAGGCGATAG ATCACGACGT
GGGGATGACC GATACTTATT TCTTGAAGCT ATAATCTCGT CAAGAAACTC GTTATACCTG
AGTTATCAAG GCCGAAACAT CAAAAACAAT AATGAAAAAC AACCGTCATT AGTTGTAAAA
GAACTAATGG AATATCTAGC ACAAGGTTAC GGTTGGCAGT TTTCAGAAGA GCAGCTCACT
TCTGATAATA ACAATGATGA TACCAATGCC GAAAGCAATC AATCAGGTAT CTATCAATTA
GCCATGCAAG CCTTTAGTCC TAATAACTAT CGAGGAACTT GGCCAAGTTT TGATGCTAAT
TGGTTAGCGC TAGGACAAAG TTCCAATAGC GATAATGACG AGAGCATGGG AGAAGGTTCT
ACGCTTGCTA TTGAAAGTCT GGCTGTAACA CCAGAGCAAA CGGTTGAGGT CAGTTTATCT
TGCCAGCAGT TGATACGTTT TTATCAGCAT CCTGCAAAAA TGTTTGCCCA GCAGCAACTT
AATTTATATT TTGAGAATCA CGATGTCTTA CTTGAAGATG TCGAACCCTT TAGCGTTAAT
CACTTACAAA GCTATTTATT ACGACAAGAT TTACTCAGTG CCGCATTAAC TGGAACAATA
GAGTCTCCAT CAAATAAAGA TGGGTCTGAA CAGGTGATAA CCCGCGCGCA CTTATCAGGT
AAGTTCCCTG ATTTACCGAC TACAACTAAT CTATTTAAAG ATTATCAGCT GGATGTTCAA
CAATTTAGCG AAGAAATTAG CAAAGTTAAC TGTGAGAATC CTGAGCTTAT CGATTGCAAT
CTAGTGCTAG ATATTGACGG TACTGAAGTT GATGGACCTA GCGCCCAAAA AATTAGGGTT
TCACTAAATA CGAAATTAGC AGTGAAGAAT AATTTGTTAG TGCACTATCG TAGCTCAAGT
GCCAAAGCCA AAGATAAGTT TGTTATGTAT TTCCAGCAAC TTGTCGTACA GGTATGGCAA
GATCAAGCTA TTGCCAATGA AACTAATATT ACTGATGACA ATCAAAGGTT ACAGCAAGTG
ACTGAAACTA TTGGTTTATA TTTTAACACC AAAGCCCAGA AAGTAGAGCA GTTCAATGTG
GCAAACATTG CTGATGCAAA ATCAAAATTG ATTAATCTTG TTAAGATGTT TTTCAAAGGT
CAACAACAGG TATTGTTATT AAATGGTGAA TTGGCAGATC AGGTATTTAC TAAAAAACGA
GGGCAACTCG TCGAGATGAC ACAAGCACGT TTTGAAGGTT TATGGATAGG TGATATGAGC
ACGCGTGGTT TGAGTGATGA TGATTACCTT AGCTATTTTT GGCCAGAATG TCCGCAGTAT
CATAATCACC AAGCTGACAT TGAGTTTATC TATCAAGACT TATATCAAGT AGTCGCCAAA
CAAGCCGCTA AGAAAGCGAG TAAAACGACT GCTAAGCCAA GCAAGGAGGC TAAATAA
 
Protein sequence
MIHLYPANKM ENLLLLLNKI SQLSPLGVFN QEVIVVQNAG MQHWLNLAIA QERGISMNMR 
YALPAQFLWK LIRSLASDEK VPEQSPYSRE VLCWRIHALL ALDSVVEDDD FSQATHYWRG
ENTTDEEDNN TVNDSKHAQL KRYQLATQLA DLYEQYLIFR PQWLDNWQQG NFELDGLEKI
SASEHKWQGK LWRLLIAQLP YNPVELMHDA IANIQDKKEL IPPRISFFGL NTMAPMWLNF
INALSEHVEV HFFHLNPCFS YWGDVVTEKY ALNKLSQWSD GVLPEELDVH SYVGNPLLAN
LGQQGREFIS MLQDYSTIDV ELFEQAKSAQ AISNNNDVTS VLHQLQNDIL ELSDARSPDD
EAITPKAVQH DDSIVITSCH SALREVQALH DYLLHQFNQD KSLTPKDILV MCPQIEQYAP
YVNAVFTRGW QDIAGEVPPL PCSIADRSAK DSDPLVAAFT ELLTLPDSRF GVSQLLSFLR
LPAMANNFSI NGEDLAKISA WLEQATVHWG LDLTHKQSLL GQQANASFTW QQGLSRLLRG
FAYADSEQIY QQQLLLSNVE GSDSILLGQL MLFIEQLHYF SENLQRSRTA IQWQTFLLEQ
LSHLFSRVDA DNVSNENSLM VIEQAIAGLV EHCHHAHFED DISLLIVVDY LSQHFSQGDA
SKQFMVGQVT FCSMLPMRSI PFKVIAVLGL NDGEFPRQRQ ALGFDLMSLS KAKLGDRSRR
GDDRYLFLEA IISSRNSLYL SYQGRNIKNN NEKQPSLVVK ELMEYLAQGY GWQFSEEQLT
SDNNNDDTNA ESNQSGIYQL AMQAFSPNNY RGTWPSFDAN WLALGQSSNS DNDESMGEGS
TLAIESLAVT PEQTVEVSLS CQQLIRFYQH PAKMFAQQQL NLYFENHDVL LEDVEPFSVN
HLQSYLLRQD LLSAALTGTI ESPSNKDGSE QVITRAHLSG KFPDLPTTTN LFKDYQLDVQ
QFSEEISKVN CENPELIDCN LVLDIDGTEV DGPSAQKIRV SLNTKLAVKN NLLVHYRSSS
AKAKDKFVMY FQQLVVQVWQ DQAIANETNI TDDNQRLQQV TETIGLYFNT KAQKVEQFNV
ANIADAKSKL INLVKMFFKG QQQVLLLNGE LADQVFTKKR GQLVEMTQAR FEGLWIGDMS
TRGLSDDDYL SYFWPECPQY HNHQADIEFI YQDLYQVVAK QAAKKASKTT AKPSKEAK