Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2769 |
Symbol | recC |
ID | 3519224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 2887100 |
End bp | 2890696 |
Gene Length | 3597 bp |
Protein Length | 1198 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637285222 |
Product | exodeoxyribonuclease V, gamma subunit |
Protein accession | YP_269481 |
Protein GI | 71279256 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATCCATC TTTATCCTGC CAACAAAATG GAAAACTTGT TGCTCTTGCT CAACAAAATT TCCCAGCTTT CCCCTCTAGG TGTATTTAAT CAAGAAGTCA TTGTGGTACA AAATGCAGGT ATGCAGCATT GGCTTAATTT AGCCATTGCA CAAGAACGCG GTATTAGCAT GAATATGCGT TACGCGTTAC CAGCTCAGTT TCTATGGAAG CTAATAAGGT CGCTGGCTAG TGATGAGAAG GTGCCTGAAC AGTCACCTTA TTCAAGGGAG GTGCTTTGTT GGCGTATACA TGCACTGTTA GCGCTAGATT CTGTAGTAGA AGATGATGAT TTTAGTCAAG CTACGCACTA TTGGCGTGGC GAAAATACGA CAGACGAAGA GGATAATAAT ACAGTTAATG ATAGCAAACA TGCACAGCTA AAACGGTATC AGTTAGCCAC ACAATTGGCC GATTTATATG AGCAGTATTT GATTTTCAGA CCGCAGTGGT TAGACAATTG GCAACAAGGA AATTTTGAAC TAGACGGCTT AGAAAAAATA TCAGCCAGTG AGCATAAATG GCAAGGCAAG CTGTGGCGAT TATTAATTGC CCAATTACCT TATAATCCTG TTGAATTAAT GCATGATGCT ATTGCTAACA TTCAGGACAA AAAAGAGCTT ATTCCACCGC GTATTAGTTT TTTTGGTCTT AATACCATGG CACCAATGTG GTTGAATTTT ATTAATGCCC TAAGTGAGCA TGTTGAAGTA CATTTCTTTC ATCTTAACCC GTGTTTCTCG TATTGGGGCG ATGTCGTTAC TGAAAAATAC GCCTTAAATA AGTTATCACA ATGGTCTGAT GGCGTTTTAC CCGAGGAATT GGATGTACAT AGCTATGTCG GTAATCCGTT ATTAGCCAAC TTGGGCCAGC AGGGGCGCGA GTTTATCTCA ATGTTACAAG ATTACAGTAC CATCGATGTT GAGTTATTTG AGCAAGCTAA AAGTGCCCAA GCAATAAGTA ATAATAACGA CGTAACGAGT GTTTTACATC AGCTGCAAAA CGATATTCTT GAACTGTCTG ATGCAAGATC TCCCGATGAT GAAGCCATCA CTCCCAAAGC AGTACAACAT GATGATTCAA TTGTGATCAC CAGTTGTCAT AGCGCATTAC GGGAAGTCCA AGCACTACAT GACTATTTAT TGCATCAATT TAATCAAGAC AAAAGCTTAA CACCTAAAGA TATCTTGGTT ATGTGTCCAC AAATAGAACA ATATGCCCCC TATGTAAATG CCGTATTTAC CCGTGGTTGG CAAGACATAG CAGGTGAAGT GCCGCCACTA CCTTGTTCTA TTGCTGATCG CAGTGCTAAA GATAGTGACC CGCTAGTAGC CGCTTTTACT GAATTACTGA CATTGCCGGA TAGCCGCTTT GGTGTCTCAC AATTGTTATC TTTTTTACGT TTACCTGCCA TGGCTAATAA CTTTTCGATT AACGGCGAAG ACTTAGCTAA AATTTCTGCT TGGCTTGAAC AAGCCACGGT ACACTGGGGA TTAGACTTAA CCCACAAACA ATCATTGTTA GGGCAACAAG CAAACGCTTC ATTTACTTGG CAACAAGGCT TGTCACGTTT ACTTCGTGGT TTTGCTTATG CCGACAGCGA ACAAATTTAT CAACAACAAC TGTTATTGAG TAATGTTGAA GGTAGTGACA GCATCTTACT CGGTCAGTTA ATGTTATTTA TCGAACAATT ACATTACTTT AGTGAAAATC TGCAAAGATC TCGCACCGCG ATACAATGGC AAACTTTTTT ACTTGAACAA TTAAGCCATT TATTTAGCCG AGTCGATGCC GACAACGTCA GTAATGAAAA TAGCCTGATG GTGATTGAGC AAGCAATTGC AGGCCTGGTC GAACATTGTC ACCACGCTCA TTTTGAAGAT GATATATCAC TATTAATTGT GGTTGATTAT TTAAGCCAAC ATTTTAGCCA AGGTGATGCC AGTAAGCAGT TTATGGTCGG GCAGGTAACC TTTTGCTCTA TGTTACCTAT GCGTAGTATT CCGTTTAAGG TAATCGCGGT TTTGGGGTTG AATGATGGAG AATTCCCTAG ACAACGACAA GCCTTAGGTT TTGATCTTAT GTCGTTGTCA AAAGCTAAAT TAGGCGATAG ATCACGACGT GGGGATGACC GATACTTATT TCTTGAAGCT ATAATCTCGT CAAGAAACTC GTTATACCTG AGTTATCAAG GCCGAAACAT CAAAAACAAT AATGAAAAAC AACCGTCATT AGTTGTAAAA GAACTAATGG AATATCTAGC ACAAGGTTAC GGTTGGCAGT TTTCAGAAGA GCAGCTCACT TCTGATAATA ACAATGATGA TACCAATGCC GAAAGCAATC AATCAGGTAT CTATCAATTA GCCATGCAAG CCTTTAGTCC TAATAACTAT CGAGGAACTT GGCCAAGTTT TGATGCTAAT TGGTTAGCGC TAGGACAAAG TTCCAATAGC GATAATGACG AGAGCATGGG AGAAGGTTCT ACGCTTGCTA TTGAAAGTCT GGCTGTAACA CCAGAGCAAA CGGTTGAGGT CAGTTTATCT TGCCAGCAGT TGATACGTTT TTATCAGCAT CCTGCAAAAA TGTTTGCCCA GCAGCAACTT AATTTATATT TTGAGAATCA CGATGTCTTA CTTGAAGATG TCGAACCCTT TAGCGTTAAT CACTTACAAA GCTATTTATT ACGACAAGAT TTACTCAGTG CCGCATTAAC TGGAACAATA GAGTCTCCAT CAAATAAAGA TGGGTCTGAA CAGGTGATAA CCCGCGCGCA CTTATCAGGT AAGTTCCCTG ATTTACCGAC TACAACTAAT CTATTTAAAG ATTATCAGCT GGATGTTCAA CAATTTAGCG AAGAAATTAG CAAAGTTAAC TGTGAGAATC CTGAGCTTAT CGATTGCAAT CTAGTGCTAG ATATTGACGG TACTGAAGTT GATGGACCTA GCGCCCAAAA AATTAGGGTT TCACTAAATA CGAAATTAGC AGTGAAGAAT AATTTGTTAG TGCACTATCG TAGCTCAAGT GCCAAAGCCA AAGATAAGTT TGTTATGTAT TTCCAGCAAC TTGTCGTACA GGTATGGCAA GATCAAGCTA TTGCCAATGA AACTAATATT ACTGATGACA ATCAAAGGTT ACAGCAAGTG ACTGAAACTA TTGGTTTATA TTTTAACACC AAAGCCCAGA AAGTAGAGCA GTTCAATGTG GCAAACATTG CTGATGCAAA ATCAAAATTG ATTAATCTTG TTAAGATGTT TTTCAAAGGT CAACAACAGG TATTGTTATT AAATGGTGAA TTGGCAGATC AGGTATTTAC TAAAAAACGA GGGCAACTCG TCGAGATGAC ACAAGCACGT TTTGAAGGTT TATGGATAGG TGATATGAGC ACGCGTGGTT TGAGTGATGA TGATTACCTT AGCTATTTTT GGCCAGAATG TCCGCAGTAT CATAATCACC AAGCTGACAT TGAGTTTATC TATCAAGACT TATATCAAGT AGTCGCCAAA CAAGCCGCTA AGAAAGCGAG TAAAACGACT GCTAAGCCAA GCAAGGAGGC TAAATAA
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Protein sequence | MIHLYPANKM ENLLLLLNKI SQLSPLGVFN QEVIVVQNAG MQHWLNLAIA QERGISMNMR YALPAQFLWK LIRSLASDEK VPEQSPYSRE VLCWRIHALL ALDSVVEDDD FSQATHYWRG ENTTDEEDNN TVNDSKHAQL KRYQLATQLA DLYEQYLIFR PQWLDNWQQG NFELDGLEKI SASEHKWQGK LWRLLIAQLP YNPVELMHDA IANIQDKKEL IPPRISFFGL NTMAPMWLNF INALSEHVEV HFFHLNPCFS YWGDVVTEKY ALNKLSQWSD GVLPEELDVH SYVGNPLLAN LGQQGREFIS MLQDYSTIDV ELFEQAKSAQ AISNNNDVTS VLHQLQNDIL ELSDARSPDD EAITPKAVQH DDSIVITSCH SALREVQALH DYLLHQFNQD KSLTPKDILV MCPQIEQYAP YVNAVFTRGW QDIAGEVPPL PCSIADRSAK DSDPLVAAFT ELLTLPDSRF GVSQLLSFLR LPAMANNFSI NGEDLAKISA WLEQATVHWG LDLTHKQSLL GQQANASFTW QQGLSRLLRG FAYADSEQIY QQQLLLSNVE GSDSILLGQL MLFIEQLHYF SENLQRSRTA IQWQTFLLEQ LSHLFSRVDA DNVSNENSLM VIEQAIAGLV EHCHHAHFED DISLLIVVDY LSQHFSQGDA SKQFMVGQVT FCSMLPMRSI PFKVIAVLGL NDGEFPRQRQ ALGFDLMSLS KAKLGDRSRR GDDRYLFLEA IISSRNSLYL SYQGRNIKNN NEKQPSLVVK ELMEYLAQGY GWQFSEEQLT SDNNNDDTNA ESNQSGIYQL AMQAFSPNNY RGTWPSFDAN WLALGQSSNS DNDESMGEGS TLAIESLAVT PEQTVEVSLS CQQLIRFYQH PAKMFAQQQL NLYFENHDVL LEDVEPFSVN HLQSYLLRQD LLSAALTGTI ESPSNKDGSE QVITRAHLSG KFPDLPTTTN LFKDYQLDVQ QFSEEISKVN CENPELIDCN LVLDIDGTEV DGPSAQKIRV SLNTKLAVKN NLLVHYRSSS AKAKDKFVMY FQQLVVQVWQ DQAIANETNI TDDNQRLQQV TETIGLYFNT KAQKVEQFNV ANIADAKSKL INLVKMFFKG QQQVLLLNGE LADQVFTKKR GQLVEMTQAR FEGLWIGDMS TRGLSDDDYL SYFWPECPQY HNHQADIEFI YQDLYQVVAK QAAKKASKTT AKPSKEAK
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