| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2752 |
|---|
| Symbol | |
|---|
| ID | 3520807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 2866203 |
|---|
| End bp | 2866730 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637285205 |
|---|
| Product | acetyltransferase |
|---|
| Protein accession | YP_269464 |
|---|
| Protein GI | 71280341 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.5249 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAACTGG CCGATGGAAG AATTAAGTTA TTACCATTTG ATAAATCAGA TTTTGAGCTA
TTTTTAGAAA TATCTACTTG CCCAAATATT ATGAGGCACG TTTCTAGGCC TTTTACTTAT
GAAGAAGCAA AATCAGCTTT CGAAGTTAGG TCTCGACCTT GGAGTATTGA AAGTGAAGAA
TGGCTTTCAC TATGCATAAC TGAAATAGAA AGTGGTGAAA AACTTGGTAG TATTGCGCTT
AAAATAGTGA ACCATGAGGC AAAGATTGCT GAAGTCGGCT TCATCATAAG GAAAAGTGCC
CAAGGAAGAG GCATTGCTAA TAGTGCATTA AAGCTCCTCA AAGAGTATTC GTTCAGCGAA
TTAACACTTA ATAAGTTAGT CGCATTTTGT TCCGTTCATA ATGCTGGTTC ATATAAGTTA
CTCGAAAAGC AGGACTTTGT CCGTGAAGGT TGCTTTAAAG AAAATACCTT TATGAATAAT
CAATATATAG ATGATTATGC ATATGGTTTG TGCAAGTCAG CTTTATAA
|
|---|
| Protein sequence | MQLADGRIKL LPFDKSDFEL FLEISTCPNI MRHVSRPFTY EEAKSAFEVR SRPWSIESEE
WLSLCITEIE SGEKLGSIAL KIVNHEAKIA EVGFIIRKSA QGRGIANSAL KLLKEYSFSE
LTLNKLVAFC SVHNAGSYKL LEKQDFVREG CFKENTFMNN QYIDDYAYGL CKSAL
|
|---|
| |