| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2747 |
|---|
| Symbol | |
|---|
| ID | 3519935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 2861497 |
|---|
| End bp | 2862456 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637285200 |
|---|
| Product | ornithine cyclodeaminase |
|---|
| Protein accession | YP_269459 |
|---|
| Protein GI | 71279476 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.908103 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTCA ATGCAACCCA ACTTCAAGCT GCTTTACCTT GGGATTCCCT AATTGAAGCT
TTAAAAGACA TATTTGTTCG TGAAGTATGT TCGCCAGTTC GCCACCATCA CAGCATAAAT
GTACCAGATA AGTTAAGTGC AACCTTGCTT TTAATGCCCG CATGGCTAGA AGGGGAATAC
CTTGGAATAA AGCAAGTTAA TGTTTTCCCC AGTAATAACG TCAGTAATAT ACCTGCTCTT
AGTAGCCATT ACATGTTGAG TTGTGGCAAA ACAGGTCAAC CATTGATGCA ACTCGATGGA
AATGAACTGA CGGCGCGACG GACTGCTGCA GCTTCAGCAC TGGCCTCAGC TTATTTATCT
CGTGAAGATG CTCGTGTAAT GCTCATGGTA GGATCAGGGC GAATGGCGCG GCGTTTAATC
ACTGCCCACA TGAGCGTGCG ACCTATTAAA ATCGTACAAG TGTGGGATCG TAAGGAGGAA
AAAGCACAGA CATTAGTAAC TGAGCTCAAA GAAAGTGGTA TAAATGCTGA AGTGTGTAAA
CCAGATAACC TGCAAGCAGC AGCCCAGCAG GCAGACATTA TTAGCTGCGC TACTATGGCA
ACCAGTCCAT TAATTTTAGG TAAGTGGCTA AAACCAGGAG CACACCTCGA CTTAGTGGGT
AGCTTCACTC CAACAATGAG AGAAACAGAT AATGCGGCTA TGCAACTGTG TTCGGTGTTT
GTTGATACTC GTGCAGGCGC ATTATCTGAA ACGGGTGATT TAATTATCCC AATTCGAGAT
GGGGCGATTA CTCAAGAGAA AATTATCGCA GAATTTACTC AACTGTGCAG CGGAGAGCAT
CGAGGTAGAG CCGATTTAGC CAATCCTGAT AATAGCATTA CCTTATTTAA ATCTGTCGGC
GATTCCCGTG AAGATTTAGC AGCAGCAATA CTCGCATTTG AACAGTGTAA TCAACGCTAA
|
|---|
| Protein sequence | MQLNATQLQA ALPWDSLIEA LKDIFVREVC SPVRHHHSIN VPDKLSATLL LMPAWLEGEY
LGIKQVNVFP SNNVSNIPAL SSHYMLSCGK TGQPLMQLDG NELTARRTAA ASALASAYLS
REDARVMLMV GSGRMARRLI TAHMSVRPIK IVQVWDRKEE KAQTLVTELK ESGINAEVCK
PDNLQAAAQQ ADIISCATMA TSPLILGKWL KPGAHLDLVG SFTPTMRETD NAAMQLCSVF
VDTRAGALSE TGDLIIPIRD GAITQEKIIA EFTQLCSGEH RGRADLANPD NSITLFKSVG
DSREDLAAAI LAFEQCNQR
|
|---|
| |