Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2722 |
Symbol | |
ID | 3521982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2839791 |
End bp | 2840960 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637285175 |
Product | putative alpha-methylacyl-CoA racemase |
Protein accession | YP_269434 |
Protein GI | 71281510 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAGCG ATATTAAAAT TTTAGATCTT TCCACCCTAC TTCCTGGCCC ATACGCCTCA ATGATGCTTG CCGATCTCGG CGCAAAGGTT TTACGAGTTG AATCACCAAC TCGCGTTGAT TTAGTCAGAG AAATGTCACC CCAAGTAGGC GCATCATCCG CTGCTCATCA ATATTTGAAT CGTTCTAAAG AATCAATCGC ACTCGATTTA AAACAACCAG AAGCTATTGA AATTATTAAA ACACTGATCA AAGAGTATGA TGTGGTGCTT GAGCAGTTTA GGCCTGGCGT CATGGACAGG CTCGGCATTG GTTATGAAGC GCTAAAAGCA GTTAACCCTA AAATAATCTA TTGTGCGATC ACTGGTTATG GTCAAACAGG GCCTTACAAA AATCGCGCAG GACATGATTT AAATTACCTA GCCATTGCTG GCATTAGCAG TTATTCCAAA AGAAAAGAAC AATCGCCTAT TCCTCAGGGC ATTCAAATAG CCGATGTTGC CGGCGGTTCG CTGCATGGTG TTATTGGTAT ATTAACCGCA CTACATCACC GTCAACGTAC AGGAGAAGGT CAAATGATTG ATATCAGTAT GACCGACTGT GCTTTTGCAT TGAATGCAAT GAGTGGTGCA GGTACGCTCG CTGGTGATGA AATACCAACA GCTGAATCTC AACTGCTGAA TGGTGGGACT TTTTATGATT ATTATCAGAC CAGCGATGGT CGTTACCTGT CCGTTGGTAG CTTAGAGCCA AAATTCTTTA CTGGTTTGTG CCAACTACTC GACTTAGAGC ACCTTCTGCC ACTAGCAAGC AAGTCCTCAG CACAACAACA AATTAAAGAC AGTTTTACTC ACGCTTTTAA GCAAAAAACT TATCAGCAAT GGCAGGCAAT ATTTATCAAG CTTGATTTAT GTGTTGAGCC AGTACTTAAC CTAAAAGAAG CTAGTGAGCA TCCTCAGATA GTTGCCAGAG AGTTGATTGT CGATGTGCCG CATCCGAAAA CAGGCATGCA AAAACAACTA GCTTGTCCCA TTAAATTTTC AGCTTACCAA GCTGAATATC AACAAGCAGG TGTTGAGCTA GGTGTAGATG GCAAGCAAGT ACTATCTGAA CTGGGTTTAA GTAATAGCAG AATAACGGCG CTTGAAAAAA ATGGCGTAGT AACCTTTTAG
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Protein sequence | MLSDIKILDL STLLPGPYAS MMLADLGAKV LRVESPTRVD LVREMSPQVG ASSAAHQYLN RSKESIALDL KQPEAIEIIK TLIKEYDVVL EQFRPGVMDR LGIGYEALKA VNPKIIYCAI TGYGQTGPYK NRAGHDLNYL AIAGISSYSK RKEQSPIPQG IQIADVAGGS LHGVIGILTA LHHRQRTGEG QMIDISMTDC AFALNAMSGA GTLAGDEIPT AESQLLNGGT FYDYYQTSDG RYLSVGSLEP KFFTGLCQLL DLEHLLPLAS KSSAQQQIKD SFTHAFKQKT YQQWQAIFIK LDLCVEPVLN LKEASEHPQI VARELIVDVP HPKTGMQKQL ACPIKFSAYQ AEYQQAGVEL GVDGKQVLSE LGLSNSRITA LEKNGVVTF
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