Gene CPS_2722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_2722 
Symbol 
ID3521982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp2839791 
End bp2840960 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content42% 
IMG OID637285175 
Productputative alpha-methylacyl-CoA racemase 
Protein accessionYP_269434 
Protein GI71281510 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAGCG ATATTAAAAT TTTAGATCTT TCCACCCTAC TTCCTGGCCC ATACGCCTCA 
ATGATGCTTG CCGATCTCGG CGCAAAGGTT TTACGAGTTG AATCACCAAC TCGCGTTGAT
TTAGTCAGAG AAATGTCACC CCAAGTAGGC GCATCATCCG CTGCTCATCA ATATTTGAAT
CGTTCTAAAG AATCAATCGC ACTCGATTTA AAACAACCAG AAGCTATTGA AATTATTAAA
ACACTGATCA AAGAGTATGA TGTGGTGCTT GAGCAGTTTA GGCCTGGCGT CATGGACAGG
CTCGGCATTG GTTATGAAGC GCTAAAAGCA GTTAACCCTA AAATAATCTA TTGTGCGATC
ACTGGTTATG GTCAAACAGG GCCTTACAAA AATCGCGCAG GACATGATTT AAATTACCTA
GCCATTGCTG GCATTAGCAG TTATTCCAAA AGAAAAGAAC AATCGCCTAT TCCTCAGGGC
ATTCAAATAG CCGATGTTGC CGGCGGTTCG CTGCATGGTG TTATTGGTAT ATTAACCGCA
CTACATCACC GTCAACGTAC AGGAGAAGGT CAAATGATTG ATATCAGTAT GACCGACTGT
GCTTTTGCAT TGAATGCAAT GAGTGGTGCA GGTACGCTCG CTGGTGATGA AATACCAACA
GCTGAATCTC AACTGCTGAA TGGTGGGACT TTTTATGATT ATTATCAGAC CAGCGATGGT
CGTTACCTGT CCGTTGGTAG CTTAGAGCCA AAATTCTTTA CTGGTTTGTG CCAACTACTC
GACTTAGAGC ACCTTCTGCC ACTAGCAAGC AAGTCCTCAG CACAACAACA AATTAAAGAC
AGTTTTACTC ACGCTTTTAA GCAAAAAACT TATCAGCAAT GGCAGGCAAT ATTTATCAAG
CTTGATTTAT GTGTTGAGCC AGTACTTAAC CTAAAAGAAG CTAGTGAGCA TCCTCAGATA
GTTGCCAGAG AGTTGATTGT CGATGTGCCG CATCCGAAAA CAGGCATGCA AAAACAACTA
GCTTGTCCCA TTAAATTTTC AGCTTACCAA GCTGAATATC AACAAGCAGG TGTTGAGCTA
GGTGTAGATG GCAAGCAAGT ACTATCTGAA CTGGGTTTAA GTAATAGCAG AATAACGGCG
CTTGAAAAAA ATGGCGTAGT AACCTTTTAG
 
Protein sequence
MLSDIKILDL STLLPGPYAS MMLADLGAKV LRVESPTRVD LVREMSPQVG ASSAAHQYLN 
RSKESIALDL KQPEAIEIIK TLIKEYDVVL EQFRPGVMDR LGIGYEALKA VNPKIIYCAI
TGYGQTGPYK NRAGHDLNYL AIAGISSYSK RKEQSPIPQG IQIADVAGGS LHGVIGILTA
LHHRQRTGEG QMIDISMTDC AFALNAMSGA GTLAGDEIPT AESQLLNGGT FYDYYQTSDG
RYLSVGSLEP KFFTGLCQLL DLEHLLPLAS KSSAQQQIKD SFTHAFKQKT YQQWQAIFIK
LDLCVEPVLN LKEASEHPQI VARELIVDVP HPKTGMQKQL ACPIKFSAYQ AEYQQAGVEL
GVDGKQVLSE LGLSNSRITA LEKNGVVTF