Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2683 |
Symbol | umuD2 |
ID | 3519910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 2791811 |
End bp | 2792224 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637285137 |
Product | umuD protein |
Protein accession | YP_269397 |
Protein GI | 71279451 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0640806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGTTA TTCCAATATA TGCCGAAGCT GGTATTTCAG GCTTTGAATC TCCAGCAGCA GAATATAAAG AATTAGGCTT ATCGCTTGAT CAATTAATCA TAAAACATCC CAATGCTACC TTCATTGGGC AGGCTTCTGG CCAATCAATG AAAGGGGTAG GAATATTTGA TGGCGATATT CTTATTGTCG ACAGATCATT AACCGCTAGA AATGGTGATG TTATTGTGGC TAATTACAAC GGTTGTTTCG TCTGTAAATT GATCGACAAG GTGCAAGCTA GGCTATTATC AGCCTCTGCT GATTTTGCGC CTGTCTCAAT TACCCCTGAA GATGAATTTT CACTAGAGGG CGTTGTTACT CGCTCTATTC GTCTACATCA TAAATCTCCA GAGTTAGCGG CATGTATGCT TTAG
|
Protein sequence | MKVIPIYAEA GISGFESPAA EYKELGLSLD QLIIKHPNAT FIGQASGQSM KGVGIFDGDI LIVDRSLTAR NGDVIVANYN GCFVCKLIDK VQARLLSASA DFAPVSITPE DEFSLEGVVT RSIRLHHKSP ELAACML
|
| |