Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2647 |
Symbol | |
ID | 3521235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 2751002 |
End bp | 2752177 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637285101 |
Product | hypothetical protein |
Protein accession | YP_269361 |
Protein GI | 71280766 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2942] N-acyl-D-glucosamine 2-epimerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.372214 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTTT ATGATCATTC TTTTTTAGTC GAGCACTGCA AGAGTATTCT CGATTTTTAT GACCATGGTG TATTAGATGA ACATGGAGGC TATTTTCAAA ATTTTTATGA TGATGGCACA ACCTTTAATA AAGGTTTTAA ACAATTAGTC AGTAGCACCC GGATTATAGT GAATTACGCT ACGGCTGCCA GCATACTCAA TAAGCCGAAA TATTTAGAAA CCGCACAGCA TGGTTTAGAT TATTTAGAAC AAGTACATTG GCAAAGTGAT AGTCAAAATT ATGCTTGGAC TTTACAAGAT AATAAGCCAC TAGATATGAC ACAACAAGCC TATGGTTATG CCTTTGTATT ACTGGCCTAT GCGGCAGCGC GTAAAGCGGG CATGATAAAA AAAGATGACA AGTTAAATGA TGTCTATCAA TTGCTTGAAG AGCGTTTTTG GCAGGCTGAA TATGGTTTAT ATGCAGATAC TCTTAGTATT GATGGAGTCT TATCTGACTA CCGTGGCCAA AATGCGAATA TGCATATTTG TGAAGCGATG ATTTCGGCCT ATGAAGCAAC GAATAACTCA GTATTTTTAA AGCGAGCAGA AGTTATTGCA GAAAATATTA GTTGTAAACA AGCTGCGCTT ACCAATAATT TAATTTGGGA GCACTACACT AAAGATTTCC AACCTGATTG GTTATATAAC AAAGACGACC CTAAAAACCT TTATCGTCCT TGGGGGTTTC AACCAGGACA CCAAACCGAG TGGACAAAAC TATTATTACA ATTAAACAGT CATGCGCCGC AAGACTGGTT AGTAGTAAAG GCTCAGCAGC TATTTGATGG CAGTTTTGAT AAGTCTTGGG ATGATAGTCA TGGAGGCCTA ATCTACGGTT TTGATCCTGA AGGCAACTGG TGTGACGATG ATAAATACTT TTGGGTGCAA GCTGAAAGCT TTGCTGCCGC GGCTTTATTA TATAAGGCAA CAGACAACTC AAAATATTTA AAACATTATC AATCACTGTG GAAATATAGT TGGCAACACT TTGTTGATCA TCAGCATGGA GCATGGTTTA GGGTTTTGCA TCGTGATAAT TCGAAATACT CTAACGAAAA AAGTGCAGCT GGGGCTAAAT GTGATTATCA CACATTGGGA TCTTGTTTTG AGGTTATTAA ATCATTACAG CAGTAA
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Protein sequence | MNFYDHSFLV EHCKSILDFY DHGVLDEHGG YFQNFYDDGT TFNKGFKQLV SSTRIIVNYA TAASILNKPK YLETAQHGLD YLEQVHWQSD SQNYAWTLQD NKPLDMTQQA YGYAFVLLAY AAARKAGMIK KDDKLNDVYQ LLEERFWQAE YGLYADTLSI DGVLSDYRGQ NANMHICEAM ISAYEATNNS VFLKRAEVIA ENISCKQAAL TNNLIWEHYT KDFQPDWLYN KDDPKNLYRP WGFQPGHQTE WTKLLLQLNS HAPQDWLVVK AQQLFDGSFD KSWDDSHGGL IYGFDPEGNW CDDDKYFWVQ AESFAAAALL YKATDNSKYL KHYQSLWKYS WQHFVDHQHG AWFRVLHRDN SKYSNEKSAA GAKCDYHTLG SCFEVIKSLQ Q
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