| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2576 |
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| Symbol | |
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| ID | 3519031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2680155 |
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| End bp | 2682506 |
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| Gene Length | 2352 bp |
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| Protein Length | 783 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637285030 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_269291 |
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| Protein GI | 71278346 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.333669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA AGGCAATAAA AAGCATATTC ACCTTGAGTG CCTGTGCTTT AGCAATTAAT
GCTGCAACAG CACAAGAGCA AGTAACCTTA GAAGTTATTC AAGTCACAGC ACAAAAAAGA
TCGGAAAATG CGCAAGAAAC GCCGATCTCA ATGAACGTGC TTAGTGCAGA CGATTTGAAA
GAAAAAAGCA TAGAAAAAAT TGATGACTTG CAATACTCAG TTCCAAATCT ACATATGACA
GAAACAGGCA TAAGTACCCA AATGTTTATC CGCGGCATTG GCACCGGAAA TAACCAAGGT
TTTGAGCAAT CTGTTGGCCA GTATATCGAT GGCGTACATT ATGGCCGTCA ACAGTTACTA
CGCATGCCGT TTCTTGACTT AGAGAGAATT GAAGTCTTAA AAGGACCGCA ATCAATCATG
TTTGGTAAAA ACTCTGTTGC CGGTGCACTT AACTTATCTT CAGCAAAACC AACACAAGAC
ACAGAAATTC ATCTTGGTTT ACAGTATCAA CCTACCATAG GTGCTACTGA AATCACCGGC
ATGGTATCGG GTGCTTTAAC GGATACTTTG TCAGCAAGGT TAGCCGTTCG AGACTATTCA
GAAGATGGTT ATGTTGAAAA CACGTTTAAA GACCGTGATG AAACAATTCG AGAAGAAAGC
GCTGTTCGTT TGAGCTTAAT GTGGGAACCA AGCGATACCA TGAACTTCTT ATTCAAGGTA
GAACAAGATG AGTTTGATGG TACTGGGCGA CAAATCGAAG TGATTAGAGA CGAGCCCTCT
CTTGCAGGAT CACCTATTCC AGGTGCTACC TTTAGCCAAA TACTCGGGGC TTTAGGCCAT
CCTAACGCAA TATCAGAAAA TGAATTGAAT TATCAACGCC AAGCTGATGC AGAAGAAAGT
AATAACAACA GCTTAACTAA TTCAACGTTA ACGGCTAACT TTAAATTAGG GGATTACACC
CTTACCTCGG TATCAGGTTT CGTATCATAC GATTTTGTTG AAACCTGTGA TTGTGACTAT
ACTGCTGCAC CTATATTTTC GGTCTTCATA GATGAAGAAT ATGAGCAGTT CAGTCAAGAA
ATTAGGTTGG TTTCTCCATT AGGTGAAAAG TTCGATTGGT TAGGCGGACT TTTTTATCAA
ACCAGTGAAC TTGGCTTCGA TGACAATATT AAAATACCCA CCAACAGCGT TTTAGGTTTA
TTGTCTGGTG GCGCACTATC ACCGTTAACT GGACATGGTG CAGGTCGTAA TTATCAACTA
GACACAGATA TGTTTTCTGC CTTTTTCCAA GGGCGTTATC ATTTTACCGA GGCACTAACT
CTAACCTTAG GTGCCCGTTT TACGAGTGAA GAGAAGACAT CATCTCGTAT TATGAATATT
ACTGATCTAG CTACTGGTAA TATTACCACC AACCCTATGG CACCGGCCTT ATTCGATGCT
GTCTTTGGTA TTCAAAGTGA ACAAAGCCCT TTATCACCGC AAGGACATAA CTTAAAGGGT
GAACGTAAAG AAAACTCTTT TACGCCACTA ATTAATATCA GTTATAAAAT TGATCAAAAT
ATTATGGCTT ATGCTTCTGC AACCACAGGG TTTAAAGCGG GTGGTTTTGA TGCCAGAGCT
AATAACGTTA ATTCATGGGA ATTTGAAGAA GAAGAAGCCA CAGCCTATGA AATGGGAATA
AAGTCTTTAC TGTTAGACGA TACCTTAGAA ATAAACTTAT CTTTTTACCG CACCGAATAC
GACAACTTGC AGGTTAGTCA GTTTGATGGA GTACTTGGCT TTAATGTTGG TAACGCTAAA
GAAACCGTGG TGCAAGGCGT TGAAGTAGAT GGCCGTTGGA TAATACTTGA TGGTTTATCA
ATGCAATACG GTGTTGCTTA TTTAGACCAC GAGTACAAAG ACTTTACAAA TGGTAACTGT
CACAGCAGAC AAGTTCCTGA TGGTGATATA GGTGCTGATG GCAATCAACT GTGTGATTAT
ACGGGTAAAT CAGGGCAATA CACGCCTAAG TTTACCGCCA GCATTGGTTT TGACTACTTC
ACTGATATCT CATTTTTAGG TTTTGAATAC TTCAGAACTA CGCTAGGGCT TTACCACTCG
GCAAAACAAA ATGTTGATGT TAACTTAAAT CCGCTTTATG AAGTTGACTC TTATGACAAG
GTAGATATGC GCATTGCCCT TGAAAGTGAA AACTGGAACA TTGCTTTGTT TGGTAAAAAC
ATGACGAATG AAGAAGTATT AACGTATGTG GGTAACAATC CATTATCGGG TAGTACCTTT
GGAACAGACA CTTTTTATGG TTTTGTCGAC CGACCAGCAG TCTATGGCAT ACAGCTAGAT
TATAACTTTT AG
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| Protein sequence | MKNKAIKSIF TLSACALAIN AATAQEQVTL EVIQVTAQKR SENAQETPIS MNVLSADDLK
EKSIEKIDDL QYSVPNLHMT ETGISTQMFI RGIGTGNNQG FEQSVGQYID GVHYGRQQLL
RMPFLDLERI EVLKGPQSIM FGKNSVAGAL NLSSAKPTQD TEIHLGLQYQ PTIGATEITG
MVSGALTDTL SARLAVRDYS EDGYVENTFK DRDETIREES AVRLSLMWEP SDTMNFLFKV
EQDEFDGTGR QIEVIRDEPS LAGSPIPGAT FSQILGALGH PNAISENELN YQRQADAEES
NNNSLTNSTL TANFKLGDYT LTSVSGFVSY DFVETCDCDY TAAPIFSVFI DEEYEQFSQE
IRLVSPLGEK FDWLGGLFYQ TSELGFDDNI KIPTNSVLGL LSGGALSPLT GHGAGRNYQL
DTDMFSAFFQ GRYHFTEALT LTLGARFTSE EKTSSRIMNI TDLATGNITT NPMAPALFDA
VFGIQSEQSP LSPQGHNLKG ERKENSFTPL INISYKIDQN IMAYASATTG FKAGGFDARA
NNVNSWEFEE EEATAYEMGI KSLLLDDTLE INLSFYRTEY DNLQVSQFDG VLGFNVGNAK
ETVVQGVEVD GRWIILDGLS MQYGVAYLDH EYKDFTNGNC HSRQVPDGDI GADGNQLCDY
TGKSGQYTPK FTASIGFDYF TDISFLGFEY FRTTLGLYHS AKQNVDVNLN PLYEVDSYDK
VDMRIALESE NWNIALFGKN MTNEEVLTYV GNNPLSGSTF GTDTFYGFVD RPAVYGIQLD
YNF
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