| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2566 |
|---|
| Symbol | |
|---|
| ID | 3520751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 2670395 |
|---|
| End bp | 2673112 |
|---|
| Gene Length | 2718 bp |
|---|
| Protein Length | 905 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637285020 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_269281 |
|---|
| Protein GI | 71280286 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCGTG CTGCTTTGAT CAAAGTAGGA ACTCTTGATT GCTACCTCGA AGCAAGTCAG
AATAATAATC AAATCAAAGT AAAACAATTT GCTGCAAAAC AAGTACATGA CATTTTGACC
ACTGATCACA ATGTTGTGAT CAGCGGACAG CAAAAACAAA CACTATTAGA CCAACAAGAA
ACAACCCCCG TACTGGGAAC AGCTTTATTA GAAGCTTGGC TTGCCCACGA ACAAGATAGC
GCTATTATGA TTTCGCTTTA TCAGCAAATT AGTGCGCGCA AAACAACCAC ACATTTATTA
ACACACAGCT TTAGCCAAAA GCAAAACCCT GACTTTCAAG CTTACATAAT TAACCAAGTT
GATGATGCTA AGGTTTTAGA GAAATTAAGT AAAAAAGCAT GCAATCATGT ATTAGCTCAA
CAAATTGAAG ATAAACTAAG CGCTATACAA GTCGCCATTG AGAAACCACA AAAATTAGAG
AAACAAATAC AACTGACGTT AGCAAAACTT CAAGCGTTAA AAGATGTTGG TGACTATGGT
GTTTATAAAA CCCGTAAGGC ACAGTTAATT AACGAATGGC AGACACTAGC ACTTGATTTT
GATGTTTTCA CGGAAGAAAA AAGTGTCGTA TTTAGTGATA AATATCAAAG CATTATTAGT
CAATTAGAAA AGTTATTCAT TGCTAAAGCT GAAAATTATC AACAGCAAAT CATTAGCGAC
AAGTTATCGC ATGATAAACA GCAAGACAAA AAAGAATTTA CTCAACAGCT TAATCATATT
AGCCAATCAA TCACGACAGC CGTTTTTTCT AGTGACAAAT TTGATGAAGA TTCTTTTAAA
GAGTTGCTGC GTAACCTAAC AACCAATATT AAAGCTTCTG TACTTAATAA AGATGAACAA
CAGAATTTTA TTAGCCAAGT TGTACAACTG TCTAAGCGTT TGAATGAAAT ACCTGAAATT
GCTGAATCGG TTAGCCAAGC TACCCACTTA ATTTCTAAAA TATCACAATT GACTTTACCT
AAGTCTTTAG AAGAGTTGAA CGACCGACAA CAAACGTATA ATGATTGGTT AAAAGCTTGG
CGCGTTATTG AAAAGAAAAC TGCTGGTATT TTGCCAGAGT CTATTGTGCA GGCTCAAAAA
GAAATTGTCT CTACTTGGCA GGGCGGATTG AAGTCATTGC AAAGTCAGCA AAAAGAACTT
TTCTTTCAAC ACAAAAAGAA ACTACAAGAC ATAAAACGTT TACTCAATAA TGGTAAATAC
AAAGTTTGTT TTGGTTTGTT CAAAGGCGTG AAAGAAAGTA TTCATCACTT GTCTGTACAA
CAATTGCAAC AATTACAACG TGACTTTGAC CAAGTAAGTG AGAAAATGGT CGAACTTAGC
GATTGGGAAC ATTATATCGC TACACCACGT AAGCAAGAGT TATTGCTTGC TATTCAAACT
CTGGTTGAAA CGCCATTGGA TAATCCCAAT GAGCAAGCAA AAAAAGTTAA AGAGTATCGT
GGTACATGGA ATTCATTAGG TCATGCTGAT GAAGATGTTG ATAAGCAACT CAATGAGCAG
TTTAATCAAT GCTGTGAACA AGCGTTTGCT CCTTGTCGTT TATTCTATGC CGAGCAAGAT
AAAATGCGTT TACAGCATTT AGATCAACGC CAAAAAATAC TAGCAAAAGC AGAGTTGTTT
GTTTCACAGC TAAATGACTC ACAAGAAACA CCGAAGCCAG ATTTTAAACA ACTTGACGGC
CAACTCAACA ATTTACAACA GCAATGGAAT AATGCTGGTG AAGTTGATCG TAACCAATAT
AAAAAACTGC AGCTGAAGTT TAAAGAAGCT ATTGCCCCGA TTAAAAGCGC CATTAGTGTT
TTTCATGCCA GTAATATCAC AGCAAAACAA GCATTAATCG CTAAAGCTGA AGAGTTACTA
GCAAGTGAGG ATGTTTTAGC AGCAATTGAA TCAGCTAAAC AGTTACAAGA AAAATGGCGT
GAAGTAGGTT TTGCCGGAAA TCATCAAGAA AATCAGCTGT GGCAGAAATT TCGCCAAGTT
AATGATGAAT TATTTGGTAA GAGACAACAA TTTAAATCTG AACAACAAGC AGTATTATCG
ACTCAACAAC AAGTGTTTAT TGAACAAGTG CTTGTCATTG AAGAGTCTCT TGGCGCTGTA
AAAGATGAAG ATGATAAGCA AGTATTACAG TCAATTGCGC AACGTGCAGA AATGTTACTT
AAAGACGTTA TTGCCAGTAA ACCTGTTATC AAATCTGTCG CTGCACGTAT TGAGAAAATC
AGTAAGCAAA TTGAGCAACT CATAAAAGCA AAGACCCAAG AAAAAGAACA ACAAACATGG
TCAAACTTGT TTGAGTTAAT GTCCTTACAA GCTCAAAATA ACCAAGAGTT ACAAGCATTA
CAAACATCAG CTGTTTACAA TAATATGACC AGTTTTTGGC AAAAACGTTT CCAAGAGCAT
GTTAAGTTAA CTAAACCAGC TCAAAATAGT GCTCGCTTTG ATAAAACCTT AGAAATTGAA
ATACTTGGCA AAAGTGATTC ACCGGTAGAG TTAGCCGAAC AGCGTATGAA AGTTCAAGTT
CAATTAATGC AAGAACAGAT GCAATCAGGT ACTGAGATTG ATTTGAATAA ATTGCTAATT
GATTGGTTGA TGTTAGGTTC GCTTGTTGAA AGTGACTTAC CGCTAATTGA GCGTTTAAAA
ACTATTTATT GCCAATAG
|
|---|
| Protein sequence | MRRAALIKVG TLDCYLEASQ NNNQIKVKQF AAKQVHDILT TDHNVVISGQ QKQTLLDQQE
TTPVLGTALL EAWLAHEQDS AIMISLYQQI SARKTTTHLL THSFSQKQNP DFQAYIINQV
DDAKVLEKLS KKACNHVLAQ QIEDKLSAIQ VAIEKPQKLE KQIQLTLAKL QALKDVGDYG
VYKTRKAQLI NEWQTLALDF DVFTEEKSVV FSDKYQSIIS QLEKLFIAKA ENYQQQIISD
KLSHDKQQDK KEFTQQLNHI SQSITTAVFS SDKFDEDSFK ELLRNLTTNI KASVLNKDEQ
QNFISQVVQL SKRLNEIPEI AESVSQATHL ISKISQLTLP KSLEELNDRQ QTYNDWLKAW
RVIEKKTAGI LPESIVQAQK EIVSTWQGGL KSLQSQQKEL FFQHKKKLQD IKRLLNNGKY
KVCFGLFKGV KESIHHLSVQ QLQQLQRDFD QVSEKMVELS DWEHYIATPR KQELLLAIQT
LVETPLDNPN EQAKKVKEYR GTWNSLGHAD EDVDKQLNEQ FNQCCEQAFA PCRLFYAEQD
KMRLQHLDQR QKILAKAELF VSQLNDSQET PKPDFKQLDG QLNNLQQQWN NAGEVDRNQY
KKLQLKFKEA IAPIKSAISV FHASNITAKQ ALIAKAEELL ASEDVLAAIE SAKQLQEKWR
EVGFAGNHQE NQLWQKFRQV NDELFGKRQQ FKSEQQAVLS TQQQVFIEQV LVIEESLGAV
KDEDDKQVLQ SIAQRAEMLL KDVIASKPVI KSVAARIEKI SKQIEQLIKA KTQEKEQQTW
SNLFELMSLQ AQNNQELQAL QTSAVYNNMT SFWQKRFQEH VKLTKPAQNS ARFDKTLEIE
ILGKSDSPVE LAEQRMKVQV QLMQEQMQSG TEIDLNKLLI DWLMLGSLVE SDLPLIERLK
TIYCQ
|
|---|
| |