| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2563 |
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| Symbol | |
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| ID | 3518362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2666097 |
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| End bp | 2669156 |
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| Gene Length | 3060 bp |
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| Protein Length | 1019 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637285017 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | YP_269278 |
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| Protein GI | 71278769 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTA CCCGTTTGGC AATTACCAAC AACAGAACAA CGTTCATGTT GTTACTCGTG
ATTGTTTTTT TCGGCATTAA TGCCTTTAAA AATATGCCTA AAGATTATGA TCCTGGTTTT
ATCATTCGTA CCGCACAAGT TATTACTCAA TTTCCGGGGG CTAGTCCACA GCGAGTAGAA
ATGCTGGTTA CAGACAAATT AGAGCGCGTT ATTCAAGAAC TGCCTGAATT AGACTTTGTT
AAAAGTGAGT CACGTACAGG TATCTCTATT ATTAGCGTTA ATATTAAAGA AAGTTACCGC
GATTTACGTC CTATTTGGGA TAACCTACGT CGTAAAATTG AAGCGGCTCA AGTTGAGTTA
CCCGCAGAAA GCCAGCCGTC AGTGGTTAAT GATGAGTTTG GTGATGTTTT TGGTATTGTT
ATTGGCTTAA CTGCAGAAGG TTATGATTAC CGTGAATTAA AAGACATCGC CGATCAAACA
AGAGATGCCA TGCTGCGTTT ATCCGAAACG GCAAAAGTAC AAGTATTTGG CGAACAGCAA
GAACATATCT TCCTTGAATA TGATAATGCG CACCTAGCCA GCTTAGGCAT TTCTCCGAGC
CAGTTAAGTG ACCAGTTATC TAGTCGAAAT ATTATTATCT CGGGTGGCAG TATTATTATA
GATAATGAAC AAATTACCCT TGAACCCAGT GGTAACTTTG AAAATGTTGA TGAAATAAAA
AGAACGATTA TTCAAATCCC TGGTAGCGAT CGTCTACTTT ATTTAAGTGA CTTGGTCACT
ATCAAGCGCA GTTATGTTGA TCCTGTGCAG AGTAAAGTTA GCTTATCTGG AGAGCAGGGC
ATATCGATTG CTATTGCGAT GAGGCATGGC GGTAATAATA TTTTACTGGG TCAACAGGTG
AATGAGTTAC TGGCTACATT GAATAAAAGT TACCCTATTG GCGTAAACTT TGAGGCAGTT
TCTTTTCTAC CTTTTGATGT AGAAAAGAAA GTTGATGATT TTTCTGGCAA CTTAATTCAA
GCCGTTATTG TTGTCACCTT GGTGATGTTA TTTAGTTTAG GTTTTAGAAC AGGCCTCATT
GTTGCGGTAC TGATCCCAAC GAGTATGATT TTTGCGATAC TTATCATGTC ACTGCTAAAT
ATTGGTATTG ACCAGATTTC TTTAGCGGCA CTAATTATCG CCCTTGGTAT GTTAGTCGAT
AACGGCATAG TCATGTCAGA AAATATTATG GTGTCGATGG AAAAAGGCAA AAATGCCATC
GATGCAGCAG TGGACTCTGC TAATGAGTTA AAAGTACCAC TATTAACTTC CTCACTGACC
ACAGCAGCGG CATTTTTACC TATATTTTTA GCAGAATCGT CTACAGGTGA ATACACAGCG
TCGCTATTTA AAGTAGTGAG TATTACCTTA TTGTGTTCTT GGGTCTTGTC GATGACGGTT
ATCCCGATGC TTTGTGTAAA CTTTATGAAA GTTAAAAAGA CAACGGGGCA AGTTGATAGC
CCGCTATTGG TCACATACCG AACCTTATTA AAAAATTTAC TGCGTTTTCG TTGGCTAACA
TTATCCATAA CCTTCGTCAT GATTATCATC TCTGTTTGGG GGCTTTCATT CATCCCTAAA
TTGTTTTTTC CACCGTCAGA TAGGGCATTT TTCAAAATGG AATTAGAAAT GCCCATTGGT
ACTACGTTAG CGGCGACTGA GCGAGTTACT CAAAGTATCG AAAGCTATAT TAAAGAAGAG
TTGAAAGCTA AAACCAATGA AGACCTAGGT GTTACTAATT GGGTTACTTA TGTAGGAAAT
GGTGGTCCAA GGTTTTTATT AACACATAAC CCCAAGCCGA CCAGCAGCAA TTACGCCTTA
ATGGTTATCA ATGTAACTAG CAATAAAGAA GTGGATCAAA CCATGGAAAA ATTGGAACGA
TTTAGTTTGG ATAATTTTCC TGATTTATTG GTTAAACTTC GTAAAATAGA AAATGGCTCT
CCTATTGAAA ATCCTGTAGA AGTGCGTATT AATGGTACTG ATACTGAGCA GTTATTTACC
TTGGTTGAGC AAGTTAAAAA GCGAATGAGC GCTATTAACG GAGTAAAAGG TGTTAGTGAT
AATTGGGGTA TGCCAATTAA AAAATTACAG GTTAATATTA ACCAAAGTCG TGCTCGTCGA
GCAGGTGTAT CGAGCAAAGA TATCGCTGTA TCATTACGCA CTGGCATGTC CGGATTAGAG
TTAAGTCAAT ATAGGGAAGG GGACATTGTT ATTCCTATTA CGATGCGTAC CCAAGCAGGC
GACCGCCAAG ACATTGGTAA ATTACAAGCA CTAGCAGTGT ACTCTCAGGC AAATGGCAGT
TCAGTACCTT TAACACAAGT TGCTGATATT AAGGTAGTGT GGGAATCTGC TCAAATTTTA
CGTCGTGATC GCTTAAAGAC CATTACCCTT GGTGGTCAAA TAGATAATAC CATTACCGCA
AATCAGGCAT TTAAAGAATT ACTACCTTGG CTTGAAGAAC AGCAAAAAAA CTGGCCAATC
TCCTACTCAT ATGAGTTAGG TGGAGAATTT GAAACCTCAG GCAAAGCGAA TAAATCAATA
GGTGACAAAT TACCTATTGC CGGTTTTCTT ATACTTTTAT TACTTATTGC GCAGTTTAAT
TCGGTTAGAA AAGCATTCAT TATATTGTTA ACTATTCCCT TAGGCCTTAT TGGCGTAACG
ACTGGATTAT TAGTGGGGCA ATCTTTCATC GGTTTTATGA CATTATTAGG CATAGTTTCA
TTGGCAGGTA TTGTTATTAA TAACGCAATA ATATTATTAG AACGTATACA AATAGAGGAG
CAAGCACTTC CTGGTAATCA TTTTCAGGCG ATTATTAATG CAGCTCAGCA AAGATTCAGA
CCGATTGTGT TAACGACAGC GACCACCATT TTTGGCTTAA TTCCACTATA CCTTGGAGGC
GGCGAGTTTT GGCAACCTAT GGCGATAGCT ATCATGGGTG GGTTACTGTT CTCAACTGTC
TTTACTTTAG GCGTTATCCC CGTGGTTTAC GCAGTATTGT TTTCTATCAA GGAGCAGTGA
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| Protein sequence | MNITRLAITN NRTTFMLLLV IVFFGINAFK NMPKDYDPGF IIRTAQVITQ FPGASPQRVE
MLVTDKLERV IQELPELDFV KSESRTGISI ISVNIKESYR DLRPIWDNLR RKIEAAQVEL
PAESQPSVVN DEFGDVFGIV IGLTAEGYDY RELKDIADQT RDAMLRLSET AKVQVFGEQQ
EHIFLEYDNA HLASLGISPS QLSDQLSSRN IIISGGSIII DNEQITLEPS GNFENVDEIK
RTIIQIPGSD RLLYLSDLVT IKRSYVDPVQ SKVSLSGEQG ISIAIAMRHG GNNILLGQQV
NELLATLNKS YPIGVNFEAV SFLPFDVEKK VDDFSGNLIQ AVIVVTLVML FSLGFRTGLI
VAVLIPTSMI FAILIMSLLN IGIDQISLAA LIIALGMLVD NGIVMSENIM VSMEKGKNAI
DAAVDSANEL KVPLLTSSLT TAAAFLPIFL AESSTGEYTA SLFKVVSITL LCSWVLSMTV
IPMLCVNFMK VKKTTGQVDS PLLVTYRTLL KNLLRFRWLT LSITFVMIII SVWGLSFIPK
LFFPPSDRAF FKMELEMPIG TTLAATERVT QSIESYIKEE LKAKTNEDLG VTNWVTYVGN
GGPRFLLTHN PKPTSSNYAL MVINVTSNKE VDQTMEKLER FSLDNFPDLL VKLRKIENGS
PIENPVEVRI NGTDTEQLFT LVEQVKKRMS AINGVKGVSD NWGMPIKKLQ VNINQSRARR
AGVSSKDIAV SLRTGMSGLE LSQYREGDIV IPITMRTQAG DRQDIGKLQA LAVYSQANGS
SVPLTQVADI KVVWESAQIL RRDRLKTITL GGQIDNTITA NQAFKELLPW LEEQQKNWPI
SYSYELGGEF ETSGKANKSI GDKLPIAGFL ILLLLIAQFN SVRKAFIILL TIPLGLIGVT
TGLLVGQSFI GFMTLLGIVS LAGIVINNAI ILLERIQIEE QALPGNHFQA IINAAQQRFR
PIVLTTATTI FGLIPLYLGG GEFWQPMAIA IMGGLLFSTV FTLGVIPVVY AVLFSIKEQ
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