| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2559 |
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| Symbol | |
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| ID | 3519468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2661277 |
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| End bp | 2662806 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637285013 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_269274 |
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| Protein GI | 71279032 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.620637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAAGAAT TAGTCAATAG TATTAACGGT GTCATTTGGA GCCCAGCGCT TATTTACTTG
TGTTTAGGAA CGGGTTTATT TTTCACCATC CTAACGCGCT TCGTTCAATT ACGTCACTTT
AGAGAAATGT TTCGCTTATT ACTTTCGGGT AAAAGTTCAG ATCAAGGTAT TTCATCTTTT
CAAGCATTAG CTGTTTCGTT ATCAGGTCGT GTAGGTACTG GTAATATTGC CGGTGTTGCT
GCGGCAATCG GTTTTGGTGG TCCTGGTGCA GTTTTTTGGA TGTGGATCGT AGCCTTTTTT
GGCGCCGCAA CCGCTTATAT AGAATCAACC AACGCGCAAA TATATAAAGA AGAAGAAGAC
GGTGTTTACC GTGGTGGCCC AGCTTACTAC ATTGAAAAAG CCATGGGACA GAAATGGTAT
GCCTGGATAT TCGCTATTTC TACGATAGTA GCTTGTGGTG TGCTATTACC AGTAGTTCAG
TCTAATGGTA TTGGTGATGC ATTGGTTAAT GTTTTTGGTA ACGGTGGTAC AGTACCTTCA
TTTTTAGGTG ATCTACCCTT AACTAAAGTC TATGCAGCAA CGCTTATTGT TTTAATCTTA
GGTTTCATCA TCTTTGGTGG CGTAAAGCGT ATCGCTAACT TCACTCAAAT TGTTGTTCCT
TTTATGGCGT TGGCTTATAT CATTATTGCT TGCGTTATTA TTGCTTTGCA CATCGATATT
TTACCTGATA TTTTCATGTC AATCATCACT GATGCCTTTA CGCCTATGGC TGGTTTTGGT
GCTGCAATTG GTTGGGGTGT TAAACGTGGT GTTTATTCAA ACGAAGCGGG TCAGGGTACA
GGACCTCATG CAGCAGCTGC TGCAGAAGTT GAACATCCGG CACAGCAAGG TTTAGTTCAA
GCATTCTCTG TTTATATTGA TACCTTATTT GTTTGTTCAG CTACCGCGTT TATGATTTTA
ATTACTAAGT CTTACAATGT AATGCCTGAA GGAAGCAGTG TTTTCTTAGT GCAAAATCTT
GCAGCAGATG TTGTGATCAG TGGTCCTGCA TTTACGCAGA TTGCAGTTGA CAGTGTGCTA
ACAGGTTTTG GTAAACCGTT TATCGCTATT GCGTTATTCT TCTTTGCCTT TACTACGGTA
CTTGCTTACT ACTTTATTGC AGAAAATAAT GTTTCTTATA TCAACCGAAC CATTAAAGTT
CCGGCATTAC GATTTGTTTT AAAATTAGTT ATGATGGCTG CAGTATTTTA TGGAACAGTA
GCACAACCAA GTGCAGCTTG GGGTATGGGC GATATTGGTG TTGGTTTGAT GGCATGGCTT
AATATTATCG GCATTATCAT TATCTTCTTT ATGGCAAAAC CTGCAATAAA GGCATTAAAA
GATTATGAAG CGCAACAAAA AGCAGGCGTA ACAAAATTTA CTTTTGACCC TAAGTCGTTA
GGCATTGAAA ATGCAGATTT CTGGGAAGAA CGTTTTGCTA AGGAAAACCC TGAAGCAAAC
AAAGAAGCGA ATAAAGACAA TGCAAGTTAG
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| Protein sequence | MQELVNSING VIWSPALIYL CLGTGLFFTI LTRFVQLRHF REMFRLLLSG KSSDQGISSF
QALAVSLSGR VGTGNIAGVA AAIGFGGPGA VFWMWIVAFF GAATAYIEST NAQIYKEEED
GVYRGGPAYY IEKAMGQKWY AWIFAISTIV ACGVLLPVVQ SNGIGDALVN VFGNGGTVPS
FLGDLPLTKV YAATLIVLIL GFIIFGGVKR IANFTQIVVP FMALAYIIIA CVIIALHIDI
LPDIFMSIIT DAFTPMAGFG AAIGWGVKRG VYSNEAGQGT GPHAAAAAEV EHPAQQGLVQ
AFSVYIDTLF VCSATAFMIL ITKSYNVMPE GSSVFLVQNL AADVVISGPA FTQIAVDSVL
TGFGKPFIAI ALFFFAFTTV LAYYFIAENN VSYINRTIKV PALRFVLKLV MMAAVFYGTV
AQPSAAWGMG DIGVGLMAWL NIIGIIIIFF MAKPAIKALK DYEAQQKAGV TKFTFDPKSL
GIENADFWEE RFAKENPEAN KEANKDNAS
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