| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2535 |
|---|
| Symbol | |
|---|
| ID | 3520638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 2643217 |
|---|
| End bp | 2644506 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637284989 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_269250 |
|---|
| Protein GI | 71280174 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3713] Outer membrane protein V |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0449668 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTAA TCGTCTCATT AATAGTATTG TCATTCAGTA TAAATGCAAT CGCTAAACCT
AATTCTGAAG AAAAACCCTG GGGTTTAGGT CTTCTCGTCA GGAGTGCTAG CATCCCATTT
GATGCCGAGG ATGATAAGGT TAACAGTATC GTACCTATGA TGTTTTATGA AGGTGATACT
TTTTTCTTAC GCGGCATCGA AGGTGGCGGT CACTTGTTAA AAAAAGCTGA CTGGGAACTA
AATGCCCTTG GTCGTCTGCG CTTTGTCGAT ATTCCTACTG AATACCAAAA TGAAACACAA
GCAGATACCT TTGATTTTGG TTTTCAATGG CGTAAAAACA TAAGTGACAG CCATCATTTT
GATGTGGAAA TATTGAGTGA TCTTGATGGT AAACCGTATG CTAATTTCAT CAGTAGCTGG
TACTTTCAAA ACGATAGCTG GGAATTTATG CCAAAAATAT CAGCGCGGTA TAAAAGTGCT
GAGTTTAATA GTTATTATTA TGCCTTGAAT GAATTAACAG ATGAACGCAT TGGTGCGGGT
ATTGATGTAA ATGCAACCAT TGAATCAAGA TACCATGTAA TTTCAAACTT ATACTTCATT
GGTTCACTCG GCCTAACCGG ATTAGATAAT AACGCTTATC AAAGTGCTAT TGTTGATAAA
CGCTGGCAAA GTGAAGCTTA CCTTGGTATT GCATTTTTTA ATGATAAAAC AAAAAGTAGA
AAAAGCTCCC TCAATAATGG TAGCTACCTG CGCGTTGCTC ATGGCTGGGC AACCCCTTCT
AATATTGGCG AAATTCTCGC CGGTGACACT GAAAAAGACG AATTCAACAA TCAACTCACT
TCAGTTTTCT ATGGCGTACC GCTAACGGAT GAATTATTTA GTTTACCCAT TGAGTTGTAT
CTAATCACAG GATTGGCTTG GCACTGGAGA TCAGATGTAC AAGATAGTGA ACAAGAATAT
CAACTCGGCA TCAAAGCTTA TTACACCATT CATTGGCCTG TTCGATGGCG CTTAGGGTTT
GCCGAAGGAA TTTCATATAT TTCTGATGTG ACTTATATTG AGAGAACCGA GATGGAAGAA
AAAGGCTATA GCCCAAGTAA GCTCATGAAT GCGATAGATT TTTCTATAGA TATAAATTTG
GGTGATATTT TCAATGCTAA TGCATTAAAA GGTACGTGGC TTGGCTATGG TATTCACCAT
CGTTCTTCTA TATTTGAATC GGCTTCGCAG TTTGGTCGTA TTAAAGGTGG TAGTAATTAC
AATACTGTCT ATCTGCAATT TGATTTTTAG
|
|---|
| Protein sequence | MRLIVSLIVL SFSINAIAKP NSEEKPWGLG LLVRSASIPF DAEDDKVNSI VPMMFYEGDT
FFLRGIEGGG HLLKKADWEL NALGRLRFVD IPTEYQNETQ ADTFDFGFQW RKNISDSHHF
DVEILSDLDG KPYANFISSW YFQNDSWEFM PKISARYKSA EFNSYYYALN ELTDERIGAG
IDVNATIESR YHVISNLYFI GSLGLTGLDN NAYQSAIVDK RWQSEAYLGI AFFNDKTKSR
KSSLNNGSYL RVAHGWATPS NIGEILAGDT EKDEFNNQLT SVFYGVPLTD ELFSLPIELY
LITGLAWHWR SDVQDSEQEY QLGIKAYYTI HWPVRWRLGF AEGISYISDV TYIERTEMEE
KGYSPSKLMN AIDFSIDINL GDIFNANALK GTWLGYGIHH RSSIFESASQ FGRIKGGSNY
NTVYLQFDF
|
|---|
| |