| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2522 |
|---|
| Symbol | pbuX |
|---|
| ID | 3523002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 2625901 |
|---|
| End bp | 2627250 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637284977 |
|---|
| Product | xanthine permease |
|---|
| Protein accession | YP_269238 |
|---|
| Protein GI | 71282527 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2233] Xanthine/uracil permeases |
|---|
| TIGRFAM ID | [TIGR00801] uracil-xanthine permease
[TIGR03173] xanthine permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0140814 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATTT TATATCAAGT TGAAGATAAG CCGCCTATTG GTACCTCCAT ATTACTTGCA
GCACAGCACT TACTCGCCGC TTTAGGAGCA ATCATAACTG TACCGCTAGT CGTTGGTGGT
GTTTTGAATC TACCGGTAGA GGATATTGTC GTATTGGTTA ACGCGGCAAT GCTAGTTTCG
GGTGTAGTTA CTATTATTCA GTGTAAAGGG GTTGGGCCCG TTGGAATTAG GCTTCCTTGC
GTTATGGGAA CCAGTTTTAC CTTTGTCGGC GTTTCCATCG CTATTGGATT TGAACACGGA
GTGGCAGGAA TACTAGGCTC GGCTTTAGTT GCATCACTCG TTATGATTAT TGGCAGCTTT
TTTATGCCAA TGATTAGACG ATTTTTCCCA CCAATAGTTA CAGGCACAGT TGTAACCCTA
ATTGGACTGT CATTAATTCC CGTCGCCGTT GATTGGTTTG CAGGTGGTCA AGTAGGACAA
GAAGGTTATG CATCACTGCC TAATTTAGCG ATAGGATTAT TTGTTTTAAC AACGGTGATA
CTGTTATCTA TTTTTGGCAA AGGGATCTTA TCGGCAGCCG CTGTGGTAAT AGGTATGGCG
CTGGGATTCA TGGCATGTGT GGTCTTAGGT TTGGTCGACT TTAAGCCTGT GCAAGATTCT
CCATTATTTG CTTTGCCAAG TCCTTTTCAT TTTGGTTTAA CTTTTCCAAT TAGCGGCATT
ATCGGTATGT CTATTGCCTA CTTGGTGACA ATAGTTGAAT CTACCGGTGA CTTTTTAGCA
CTATCGAATG TGACAAAAAC AAAATTAACC GGAAAGAAAT TATCTAGTGG AATATTATGT
GATGGGCTAG GTTCAGCTTT AGCGTCATTA TTTTCTACTA CCCCTTTTTC CTCTTTCTCA
CAAAACGTAG GTATTGTTGG CATGACAGGC GTAGCAAGTC GCTATGTTGT TGCCATCACG
GGCGCCATGT TGATTCTTGC TGGTTTATTT CCAATCATTG GTGCCTTGGT AGTAGCTATA
CCACTTCCTG TGCTTGGTGG TGCTGGCTTG GTTATGTTTG CAATGATAAT TACTGCAGGG
GTAAATATTT TATCTCACAC TAAACATACT AAAAGAAATG GCATTATTAT CGCGGTAAGT
ATTGGCGCGG GTATGGCAGT AACTGTACGT CCTGAGTTGT TAAGTCACTT ACCCGACTTC
CTTAAAATCA TTCTTGCTTC TGGTATTACT ACCGGCTCAG TAATTGCGTT GCTGTTAAAT
GCGGTGCTTC CTGATGGCGA TATAATTGTT GAGACTGAAG AAGAAAATCC TAGCAACAAT
GAAGTTGAAA GTTCCCCCAA CTTGATTTAA
|
|---|
| Protein sequence | MEILYQVEDK PPIGTSILLA AQHLLAALGA IITVPLVVGG VLNLPVEDIV VLVNAAMLVS
GVVTIIQCKG VGPVGIRLPC VMGTSFTFVG VSIAIGFEHG VAGILGSALV ASLVMIIGSF
FMPMIRRFFP PIVTGTVVTL IGLSLIPVAV DWFAGGQVGQ EGYASLPNLA IGLFVLTTVI
LLSIFGKGIL SAAAVVIGMA LGFMACVVLG LVDFKPVQDS PLFALPSPFH FGLTFPISGI
IGMSIAYLVT IVESTGDFLA LSNVTKTKLT GKKLSSGILC DGLGSALASL FSTTPFSSFS
QNVGIVGMTG VASRYVVAIT GAMLILAGLF PIIGALVVAI PLPVLGGAGL VMFAMIITAG
VNILSHTKHT KRNGIIIAVS IGAGMAVTVR PELLSHLPDF LKIILASGIT TGSVIALLLN
AVLPDGDIIV ETEEENPSNN EVESSPNLI
|
|---|
| |