Gene CPS_2481 details

Gene Information

• Locus tag: CPS_2481
• Symbol: soxG1
• ID: 3520881
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 2599932
• End bp: 2600528
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637284936
• Product: sarcosine oxidase, gamma subunit
• Protein accession: YP_269197
• Protein GI: 71280415
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4583] Sarcosine oxidase gamma subunit
• TIGRFAM ID: [TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTAACT CAATCCAGGT AGAATCGCCG CTACACCATG CTCAACTTGA CCAATTAATT 
GGCCAATCAA GCGCGGGTGG CATTGTCTTG CATGAGCATA AGTTATTGGG TCACCTTAAC 
TTACGTGGCA ACTGTGCGGA TGCTGAATTT TTAGCTGGTG TACAAGAAGC ACTCGGGGTC 
GCACTGCCTA TTACGCCGTG TAGCAGCGCC AAGAGTGAGC TCGCACAAAT CATGTGGTTA 
GCGCCCGATG AATGGTTAAT TATTGTCGCC TCAGGCAATG AAGATGAAGT CGAGCAAAAG 
CTGCGTTCGT ATTTAACCGG CCACTTTGCC GTCAGTGATA TCAGTGGCGC GCAAACTCTG 
ATTGAACTGA GTGGTGAGCA TGTTATCGAC TTGATGAAAA AATCAACTGG TTATGATTTA 
CACCTGGATA GCTTTCCCGT GGGTAAAGTC GTGGGTACCA CCTTTGCTAA AACGGGTGCG 
CATATCTTGC GCGTGAGCGA AGATTCGTTT CAGCTGGTGG TACGTCGCAG TTTTTCTGAC 
TATGTGTGGT TATGGATCCA ACAAGGTAGC CAAGAATACG GCCTGACGAT CGTTTAA 

 

Protein sequence

MSNSIQVESP LHHAQLDQLI GQSSAGGIVL HEHKLLGHLN LRGNCADAEF LAGVQEALGV 
ALPITPCSSA KSELAQIMWL APDEWLIIVA SGNEDEVEQK LRSYLTGHFA VSDISGAQTL 
IELSGEHVID LMKKSTGYDL HLDSFPVGKV VGTTFAKTGA HILRVSEDSF QLVVRRSFSD 
YVWLWIQQGS QEYGLTIV