| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2479 |
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| Symbol | soxD1 |
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| ID | 3523249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2596620 |
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| End bp | 2596919 |
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| Gene Length | 300 bp |
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| Protein Length | 99 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637284934 |
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| Product | sarcosine oxidase, delta subunit |
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| Protein accession | YP_269195 |
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| Protein GI | 71277842 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4311] Sarcosine oxidase delta subunit |
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| TIGRFAM ID | [TIGR01374] sarcosine oxidase, delta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTACTTA TCCACTGTCC TTATTGTGAA GAGCTGCGCG AAGAAGAAGA GTTTAGCCCT
GCTGGGCAAG CTCATATCGT GCGCCCACTT CAACCCGAAG AAATTAGTGA TGAGCAATGG
GCACGTTACT TGTTTTTCCG TAAAAACCCG CGCGGTTTAC ATCACGAGAT GTGGCTACAT
GCGGCCGGTT GTCGCAAATA TTTCAACGCG ACCCGAAACA CCGTGACCTA TGAAATCATG
GAAACTTACA AAATGGGCCT AAAGCCCAGC GTCACCGCTA GTGAAGAGGG CCAATCATGA
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| Protein sequence | MLLIHCPYCE ELREEEEFSP AGQAHIVRPL QPEEISDEQW ARYLFFRKNP RGLHHEMWLH
AAGCRKYFNA TRNTVTYEIM ETYKMGLKPS VTASEEGQS
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