| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2476 |
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| Symbol | nhaC1 |
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| ID | 3521594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2592360 |
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| End bp | 2593868 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637284931 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_269192 |
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| Protein GI | 71281124 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00931] Na+/H+ antiporter NhaC |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.629323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAA AAAATATAAT AAAACCCAGT TTATTTATGG CAATACTGCC GATAATATTG
ACACTGACAA TTCTAGGCAT TCAATTATTC TATTACGGCG ACTTTACGCC TCATATTCCT
CTCGCTATTG GAATCGCGAT TACAGCCACT TTGGGATGGT TTCGTGGTTA TCGCTGGGAT
GATATGGAAA AAGGAGTGAT GCACGTTATT CGTGTCGGGC TTCCATCAAT TGCTATTCTA
ATGACCGTTG GTATGATCGT CGGCGTCTGG ATTGCCTCAG GTACTGTACC AGCGCTAATA
TACTACGGAT TAAAAGTATT GAATCCAGAA ATATTTTTAG CTGCAGCCAT GGTGTTATGT
GCCGTAGTAT CTGTATCTTT AGGAACATCT TGGGGTACAA CAGGTACCGT AGGCCTTGCC
TTGATGGGTA TTGGTTCTGG CTTTGATGTC CCAATGTACT GGACTGCCGG GGCTGTAGTT
TCCGGTGCTT TCTTTGGTGA CAAAATATCA CCACTCTCTG ATACTACCAA TTTGGCACCT
GCAGTAACGG GCGTCAATTT ATTTGATCAT ATTCGTAATA TGTTACCAAC AACGGTACCT
GCAATGCTTA TTGCTTTGGT CATCTATATA TTCGTTGGAT TTAATCTAAT TGGTTCGAAT
GAAGTCGACT TCTCTAAAAT AGAAGCTATT ACTAATGGTC TAGAGAGCAA TTTCAATATC
AGCTTATTAG TGTTACTACC TCCATTACTG GTCATTGTGC TTGCCCTTAA AAAGATGCCT
GCCTTACCTT CGTTGTTCGC TGGTGTATTG GCTGGTGCGT TACTCGCTAT ATTCGTTCAG
GGCGCTTCAT TGCATGAAAT ATTTAACTTC ATGCAATCAG GTTATAAAAT TGAAACCGGT
GTTTCTGAAA TTGATGGCTT GCTAAATCGT GGTGGTGTTC AATCAATGAC CTGGGTTATC
ACGTTAGTTG TCATTGCGTT AGGTTTTGGC GGCGTACTTG AACGTACCAA ATGTCTGGAA
ACTATTATTA CGGCAATACT TAGCCGCGTT AAGTCATTTT TTGGCTTACA AGCATCAGCT
ACGGGTGCTG CAATAGCAAC CAACCTTGTT GCTGGCGACC CTTACCTTTC CATTGCGTTA
CCAGGAAGAA TGTTTGCACC AGCTTATGTT GATAAAGGTT ACTCGAAATT GAACTTATCA
CGTGCTGTTG AAGAAGGTGG AACCTTAATT TCTCCGCTAA TACCTTGGAA TGCTGGTGGT
GCTTTTGTTA TTACCGCACT AGGTTTGGGG ATTGCTGAAG GTAACATTGA AAACCTACTT
TATATTCCGT TAGCATTCGC CTGTTGGTTA TCTCCATTAA TTGGTTTGAC TTATGCCGCA
CTTGGACGTT TTTCACCAAA AATGTCAGCG GAAGAGTTAG ACCGATATCA ACGTGAAGAA
GAGGAAATAT CTGAAAATAA AACTGTTGAA GTAAGGAAAG GGGCGAATAT GTCCGCCAAA
CACGCTTAG
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| Protein sequence | MTEKNIIKPS LFMAILPIIL TLTILGIQLF YYGDFTPHIP LAIGIAITAT LGWFRGYRWD
DMEKGVMHVI RVGLPSIAIL MTVGMIVGVW IASGTVPALI YYGLKVLNPE IFLAAAMVLC
AVVSVSLGTS WGTTGTVGLA LMGIGSGFDV PMYWTAGAVV SGAFFGDKIS PLSDTTNLAP
AVTGVNLFDH IRNMLPTTVP AMLIALVIYI FVGFNLIGSN EVDFSKIEAI TNGLESNFNI
SLLVLLPPLL VIVLALKKMP ALPSLFAGVL AGALLAIFVQ GASLHEIFNF MQSGYKIETG
VSEIDGLLNR GGVQSMTWVI TLVVIALGFG GVLERTKCLE TIITAILSRV KSFFGLQASA
TGAAIATNLV AGDPYLSIAL PGRMFAPAYV DKGYSKLNLS RAVEEGGTLI SPLIPWNAGG
AFVITALGLG IAEGNIENLL YIPLAFACWL SPLIGLTYAA LGRFSPKMSA EELDRYQREE
EEISENKTVE VRKGANMSAK HA
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