Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2446 |
Symbol | |
ID | 3519692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2566860 |
End bp | 2567603 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637284901 |
Product | hypothetical protein |
Protein accession | YP_269162 |
Protein GI | 71278091 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.335155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTTTA TCGGTTTAAC CGCAGTTGCC TTTATTGCTG GTTTTATCAG TTCCATTGCC GGGGCAGGTG GCGCCATTGT TTTACCTGTT TTATTATGGG CAGGTTTGCC TCCACTTAAC GCCTTAGCAA CCAATAAATT TCAAAGTGTC TTTGGTACAT TATCTTCAAC AATTAATTTC TTTCGCAAGG GATATATTGA TTTGAAAGCC CTGAGGCCTG CACTGTGTTA TGCCTTTGTT GGCTCTGTGA TAGGTACCTA TTTAGTACAG CAAATATCAA CTGACTATTT GTCAGTAATG ATGCCGTATC TGCTTATTGT ATTAGCACTT TATATGATGT TCTCTCCAAC CATTACTGAT GAAGATTTAC CACCGAAAAT ATCAGAGAAA GCTTTTGCCC CCTTTATCGG TGGTGGTATC GGACTTTATG GTGGTTTTTT TGGTCCAGGA ATGGGGTCAT TTTTCGCGGT TGCTTTTGCC TCTTTACGTG GTTTTAACAT GCGAAAAGCA ACTGCTTTTA CTAAACCCTT AGTGTTAATT GTAAATACCA CATCCATGAT TATCTTTTTA TGGGGCGGAC ATATTGTCTG GAGTTTAGCT ATTACGATGG CTGCTTCACA GGTAGTGGGT GCGCGACTGG GTTCGAATTT AGTGATTCAT CGCGGCGTCG CTTTAATCAA ACCCTTAATT GTGCTGATGA CGCTGGCCAT TGCCATTAAG TTGTTAGTTG AAAGAAGTAG CTGA
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Protein sequence | MLFIGLTAVA FIAGFISSIA GAGGAIVLPV LLWAGLPPLN ALATNKFQSV FGTLSSTINF FRKGYIDLKA LRPALCYAFV GSVIGTYLVQ QISTDYLSVM MPYLLIVLAL YMMFSPTITD EDLPPKISEK AFAPFIGGGI GLYGGFFGPG MGSFFAVAFA SLRGFNMRKA TAFTKPLVLI VNTTSMIIFL WGGHIVWSLA ITMAASQVVG ARLGSNLVIH RGVALIKPLI VLMTLAIAIK LLVERSS
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