| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2440 |
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| Symbol | rarD2 |
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| ID | 3521356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2560985 |
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| End bp | 2561854 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637284895 |
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| Product | rarD protein |
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| Protein accession | YP_269156 |
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| Protein GI | 71280887 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.12249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTGGTT CGATCCTTAT ATTCTCATTG TTGCCTTATT ACATACAGTT TTTGGCGCCT
GTGGATGGTA ATACCCTGTT TTCTTTTCGT GTGTTATCAC AGTTAGGTTT TGGTTTTCTA
TTTTTGGTTT TGACTCGACA ACTGTTCGCG CTTAAAGCCG TATTTGTACA GCCAAAAGAG
TTGTTGCTGT TGTGCTTAAC ATCCCCCTTG ATCGCAATAC AATGGTGGAT ATTTTTTTGG
GGCCCTGTCA ATGGTGAAAC TATTAATATC GCGATGGGTT ACTTTTTATT ACCCATTACC
ATTAGTTTAA CCGGCCGCTT CTATTTTAAA GAAAAATTAA GTCCCCTATT ATGGCTCGCT
GTGGGCGCCG CCTTAATAGG AGTGAGCGTT GAGTTATATA GAAGCCACTC ATTCTCTTGG
GTTACTTTAC TTATTTGTTT GGCTTATCCG CCGTATTTTA TCTTGCGCCG CAAAAGCAAA
ATACCAACAA CAAGTAATTT TGTTGCAGAG AACATTTTTG TCACACCGTT GGCTTTATTG
CTGCTGTATT TTACCCACCA ACAGCAACTG CCCTTTTTGC CTTCATTAGA TTGGGGAATT
CTATTGTTAT TAGGCTCAGG GTTATTGGGC ACTGTTGCTA TGCTGTTTTT TGTTTCCGCA
TCAACACGTT TAAAATTTAC AATCTTTGGT ATGTTAAATT ATGGCGAGCC CATATTGATG
ATGCTAGTCG CAATATTTTT ATTAAATGAA GTCATAAGCC CAGAACAACT ATGGAGCTAT
GGTTTCTTTG GTATCGCGGT ATTGTTGGTT ATCGGTGATA GTCTACTGCG TATCATAATC
AGTAGAAAAA AAGCATTTCC CCCACGATAA
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| Protein sequence | MFGSILIFSL LPYYIQFLAP VDGNTLFSFR VLSQLGFGFL FLVLTRQLFA LKAVFVQPKE
LLLLCLTSPL IAIQWWIFFW GPVNGETINI AMGYFLLPIT ISLTGRFYFK EKLSPLLWLA
VGAALIGVSV ELYRSHSFSW VTLLICLAYP PYFILRRKSK IPTTSNFVAE NIFVTPLALL
LLYFTHQQQL PFLPSLDWGI LLLLGSGLLG TVAMLFFVSA STRLKFTIFG MLNYGEPILM
MLVAIFLLNE VISPEQLWSY GFFGIAVLLV IGDSLLRIII SRKKAFPPR
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