Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2392 |
Symbol | |
ID | 3522528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2507404 |
End bp | 2508567 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637284849 |
Product | hypothetical protein |
Protein accession | YP_269110 |
Protein GI | 71282056 |
COG category | [S] Function unknown |
COG ID | [COG4102] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.740599 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACGTC GTCAATTTAT CAAATCTATG GCTGCCACTT TAGTTCTATT TAAAACACCA AATGCTGTTG CTAAGGCATT ATCTGCTACT TCACCGAAAT CCGGGAATAA AAAAATTATT TGGGTTGTAT TAAGGGGGGC GATGGATTCA TTACATACCC TAGTGCCCAC TTTTGATACT GAATTATCGG TATTAAGACC CAAATTGCTC GCGAGTATTA AAGATGATTT ATTGATGTTA GATAATGGTT TTGCGCTACA TCCAAGTTTA AGTAACCTGC ACCAGTGGTA TAAAAAGGGT GAGTTACTGC CGATTACCGC GGTTTCTTCG GGGTATGCCA AGCGCTCTCA TTTTGATGGA CAAGATTATT TAGAATCAGG CTTGACTAAT ATTGACCATG ATACTGGCTG GTTAGGCCGA GCCGTTAATA TGAAGGAAAA GCAAGCGTTG GCTATAGCTA ATTCAACGCC AATTAGCTTG AGAAGCAGCG AAGCGAGTAC TTGGTATCCG TCTCAGTTAA AAGAGGCGGA TGAGGATGTG TATCAAGCCT TAATGAAAAT GTATCAAAAT GATGAGTTAT TAATTAATAG GCTTGAAGAT GGTTTAGCAG TAAAAGAGAT GGCCGATACC ATGGTAGGTG ACAGAGCACT TAACATTAAG AAAAAAGGAC AATTCATTGA GTTATCCAAA TCCTGTGCAA ATTTAATGAT GGGCAATAAT GGTGTAGATT GTGCGATGTT AGAATTGGGA GGCTGGGATA CACATAATAA CCAAGCAACC CGTTTGTCTC GGCAACTTAA AGCGCTTGAT CAAGGATTAA AAGCTTTAAA AGACGGATTA AAAGATCAGT GGCAAGATAC CGTTGTTGTT GTTGCGACAG AATTTGGCAG AACAGTAAAA GAAAATGGAA CAGGTGGAAC GGATCACGGA ACAGCAAGCG CAATGTTTAT TGCTGGTGGC TCAGTTAATG GTGGTAAAGT CTTGGGAAAT TGGCCTGGAC TGAAAAATAA CCAACTATTT GAGCAACGTG ATTTAATGCC AACTAGCAAT ACCTTCTCTT GGCTAGCAAC AGTTGTGTCC CAACAATGGT CGTTGAGTGA CAATCAGTTA AAAGCTGTAT TTCCTCACGT TGACAAAAGA ACTGTTAAGT TGTTTGTGGG CTAA
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Protein sequence | MQRRQFIKSM AATLVLFKTP NAVAKALSAT SPKSGNKKII WVVLRGAMDS LHTLVPTFDT ELSVLRPKLL ASIKDDLLML DNGFALHPSL SNLHQWYKKG ELLPITAVSS GYAKRSHFDG QDYLESGLTN IDHDTGWLGR AVNMKEKQAL AIANSTPISL RSSEASTWYP SQLKEADEDV YQALMKMYQN DELLINRLED GLAVKEMADT MVGDRALNIK KKGQFIELSK SCANLMMGNN GVDCAMLELG GWDTHNNQAT RLSRQLKALD QGLKALKDGL KDQWQDTVVV VATEFGRTVK ENGTGGTDHG TASAMFIAGG SVNGGKVLGN WPGLKNNQLF EQRDLMPTSN TFSWLATVVS QQWSLSDNQL KAVFPHVDKR TVKLFVG
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