| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2390 |
|---|
| Symbol | glk |
|---|
| ID | 3520953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 2504932 |
|---|
| End bp | 2505888 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637284847 |
|---|
| Product | glucokinase |
|---|
| Protein accession | YP_269108 |
|---|
| Protein GI | 71280487 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0837] Glucokinase |
|---|
| TIGRFAM ID | [TIGR00749] glucokinase, proteobacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.136402 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTTGCTG ATATCGGGGG CACAAACATT CGATTAGCCA TTGCTTCACC TTCGGATGTC
ATTACGGATA TAGCTACTTA TCAATGTGCG AAGTTTGCTA ATTTAATTGA TGTCATCCGG
CTGTATATAA TGGAAAAGCA ACTTGAGGGT AAAACTATCA ATGCTTGTTT AGCCATTGCC
TGTCCGGTAG ATGATGATTA CATTTCCATG ACCAATTTAC CTTGGCAGTT CTCTCAAAAA
GATTTAAAAG AACAATTAAA ATTAAATACC TTAACCTTGA TAAACGATTA CACCGCCATT
GCTCTGGCTA TTCCTTATCT TAGCGATTCT CAAAAAGTGA AAATAGGGGC TGGTGAGGCG
GTTAGTAATA AAGCTATCTC TGTATGCGGT CCTGGAACTG GCTTAGGTGT AGCTACTTTA
GTGCCATTAG ATAATAAATG GCACTGTATT AGTGGTGAAG GAGGACATGT CGATTTTGCC
CCTGTTGATG AGTTGGAAGT AAAAGTTTTT TCTTATATTT ATGCTTATAA AAAACGGGTT
TCTTATGAAC AATTATTATC TGGTTATGGC TTAGAACAGA TATATCAAGC GCTTGTTAAG
ATAACTAATG AAGGCAAAAG TAATAATTTT GTGGCCGGTG ACCTTTCGGC TGAAATTATA
AGTACTAATG CGATTAATGG TGACTGTATT TTATGCAAAC AAGCATTAGA ATTTTTTTGT
AAAGTATTAG GAAGTTTTGC TGGTAATTTA GCACTAACGG CTAATAGTTT AGGTGGCGTA
TATATTGCTG GTGGTATTGT GCCTAGGTTT ATCGACTTTA TTGAAAAGAG TGGCTTTAGA
GAACGTTTTG AAACAAAAGG GCGGTTATCC TCATTAACCC AACAAACGCC GACTTATGTG
ATAACTGAAA CTCAACCTGG CCTTTTAGGA GCCGCAGCAT ATTTGAACCA ACTTTAG
|
|---|
| Protein sequence | MVADIGGTNI RLAIASPSDV ITDIATYQCA KFANLIDVIR LYIMEKQLEG KTINACLAIA
CPVDDDYISM TNLPWQFSQK DLKEQLKLNT LTLINDYTAI ALAIPYLSDS QKVKIGAGEA
VSNKAISVCG PGTGLGVATL VPLDNKWHCI SGEGGHVDFA PVDELEVKVF SYIYAYKKRV
SYEQLLSGYG LEQIYQALVK ITNEGKSNNF VAGDLSAEII STNAINGDCI LCKQALEFFC
KVLGSFAGNL ALTANSLGGV YIAGGIVPRF IDFIEKSGFR ERFETKGRLS SLTQQTPTYV
ITETQPGLLG AAAYLNQL
|
|---|
| |