| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2388 |
|---|
| Symbol | |
|---|
| ID | 3520564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 2501867 |
|---|
| End bp | 2503276 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637284845 |
|---|
| Product | sensor histidine kinase |
|---|
| Protein accession | YP_269106 |
|---|
| Protein GI | 71280101 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.18608 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAACCA TTGTTAAATC ATGGTTACCT AAAAGGCTCA CCGGACAGCT GATTTTATTA
TTGCTTTCAA CACTCACTTT TTCTCAATTA TTTACCTTGT TTTTCTTCCT GTCTGAGTCT
GATTATATTG CGGAACAAAT TGAAACAAAG CAATTAATAC GTAGAGCAGC ACAAGCGTCA
AATGTATTAG CAACCGTGCC TGAGAAACAT CATAAAGCGA TGTTAAAAGC AATGAGTGTG
CACCGGGTTA AATTTTATAT CAGTCAATCA GCAGAAACCG ATAACACAGC GTCTTTTAAT
GAAAAGTCAT TTTTAGCTGA GCGGCTATTA TTAAGGAAAA TGCTAAATAA AGAATATGGC
AAAGTATATG TATATCAAGA CTTAGCCAGT AGTAGTCGCA TTGCTACTTT ACTTGAATAC
CTTTATCAAA AACTCAAAGA GCCTACTAAA GCTGGTAATA AAAAACCCAA ACGATTAAAA
CTTTTTACAA CAGCTATCGA GTTAAAAAAT AAGCAATGGC TGATGATGAG TGTGTATAGC
CGAGATCCTT TTCCTCTTTG GGCGAAAACA ACACTGATAT CACTGTTAAT AATGTCCTTA
GTGTTAATTG TTATCGTAGT ATTTTCTGTT AAGCGAATTA TTAGGCCATT AAATGAGTTG
GCCGATAATG CAAAAAAACT TGGCTTAGGG GAAAGTATTC AACCGATAAA GGAGCAAGGT
CCTGAAGATG TTCAACACGC GGTAAAAGCT TTTAATCAAA TGCTGTTACG CTTAAATAAA
ATGGTGACAC ATAGAGCGAG ATCCTTAGCT GCTATGTCTC ATGATTTAAG AACCCCCTTA
ACGTCTATGC GCTTGCATGC AGAATTTATT AGCGATGAAG TTACTCAAGA TAAAATTATT
GAAAAACTTG ATGAAATGGA GCACATCACT AAGGCAACGA TTTCGTTTGC TAAACAAGAC
TCATGGCTTG AAAAATCACG TAAGGTGGAT ATATGCGCTC TAATAGAGAG TTTATGCTTA
GATCTATCTG ATATTGGTTT AAATGTGACT TGTGATATCA CTGATAAAAT TAATTACTCT
TGTCGGCCCG TTGCGCTAAA ACGAGCTTTT AGTAACTTAA TTGAAAACGG TGTTAAGTAC
GGGAAATGTG TACATGTATC GATTTTTGAA AACAATAAAT CTATCAATAT AATCATTGCC
GATCAAGGGC AGGGGATCCC TGAAGCTGAA CAACAGCGTA TGTTTGAAGC ATTTGAACGT
TTGGATGACT CTAGAAACCA AAAGTCTGGT GGCATGGGAT TAGGTATGAC TATCGCCTTA
ACAGCAATAC AAGATCATGG CGGTGAAATT AAGCTGAAAA ATAGAGTAGA AAAAGGTTTA
GACGTGATTG TTAAGCTGCC GCTGAATTAA
|
|---|
| Protein sequence | MLTIVKSWLP KRLTGQLILL LLSTLTFSQL FTLFFFLSES DYIAEQIETK QLIRRAAQAS
NVLATVPEKH HKAMLKAMSV HRVKFYISQS AETDNTASFN EKSFLAERLL LRKMLNKEYG
KVYVYQDLAS SSRIATLLEY LYQKLKEPTK AGNKKPKRLK LFTTAIELKN KQWLMMSVYS
RDPFPLWAKT TLISLLIMSL VLIVIVVFSV KRIIRPLNEL ADNAKKLGLG ESIQPIKEQG
PEDVQHAVKA FNQMLLRLNK MVTHRARSLA AMSHDLRTPL TSMRLHAEFI SDEVTQDKII
EKLDEMEHIT KATISFAKQD SWLEKSRKVD ICALIESLCL DLSDIGLNVT CDITDKINYS
CRPVALKRAF SNLIENGVKY GKCVHVSIFE NNKSINIIIA DQGQGIPEAE QQRMFEAFER
LDDSRNQKSG GMGLGMTIAL TAIQDHGGEI KLKNRVEKGL DVIVKLPLN
|
|---|
| |