| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2384 |
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| Symbol | |
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| ID | 3520471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2495012 |
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| End bp | 2498194 |
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| Gene Length | 3183 bp |
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| Protein Length | 1060 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637284841 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | YP_269102 |
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| Protein GI | 71280008 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.668736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAT CTATCACTAA AGAGTCAGCT ACCGATAAAA AAGCAGCTCA AAAATACAAT
TCAATTGCAT GGATGATTAA CCACGGCATT GCGCCAAATT TACTCATGTT ATTGCTTATT
GTCGGCGGCT TAGTAATGTC GTTTATAATA CGCAAAGAAT ATATGCCTGA CGTCACCCTA
GACCGAGTAG GTATTGTTAT AAATTATCCA GGAGCCTCTC CAGATGAAAT AGAATCAGCA
ATTGCCCTGC CCATTGAAGC AATCATCACA CCATTAGAGG GCATTAAAGA AGTAAAAACA
ATTATCCGAA CAGGCCGTTT ATTCATACGC GCTGAACTAG AGGGCTCAGA TAATGCCCAA
AAGATATTTC AAGATGTTCA ACAAGCAATC ACCCGTATTA ACACATTCCC GACTGAAATG
GATAAACCCA GAATATTTCT TGCCAGTAAA GTCAGAGATG TAATGGAAAT AGTCGTGCAT
GGTGATTTAG ATGCAATAGG TATAAAGCGA CTCAGTGAAG AAATACGCGA TCGTATTTTA
CAGTCTGTTG ATATATCTAA AGTCACTTTA CATGGTACTG CAAAAGAAGA AATACATATT
GATATTTCTC AACATATGCT CAACAGCTTA CAAACTGATT TATCAACAAT AGCGAAAAAA
ATAAGTTTGT TAACCAAAGA ACAATCCACT GGTACTATTA AATCTAATAG CGGAAATATA
TTAGTTAAAG TAGATGAGCG TCTGCTTTGG GCGGATGAAT TTGCTCAACT AAGCATAATG
CCTGACAAAA ATGGCGGAGC ATTACAACTG AAGGATGTCG CTAAGATAAC AGAAGGCTTT
GCTGATTCTA AATCAATGAT CACCTTTGAT GGTCAGTTGG CCGCAAGTTT ACGCATTTAC
CGAGTAGGTG AGCAATCTCC CGACAAAATA GGTAAAGCAA TAGAGGCTAT GTGGCCAGAG
TTAGAAGCCT TGCTTCCCCC TACAGCAGGG CTAACTATTA TTGATGACGA TGCAAAAAAC
TACCAAAAAC GACTTAGTTT ATTACTAAAA AATGCATTTT TTGGCTTACT GCTCGTATTA
TTTTTTATGA GTTTATTTCT TGATTTTCGT TTAGCTTTTT GGGTAGTTGC CGGTATTCCA
AGTGCTTTCT TAGGCGCTAT TCTTTTTTTA CCAAGCTTTG GTATTTCCAT CAATATGGTG
TCTATGTTTG GCTTTATTAT TGCTCTTGGT ATTGTGGTTG ATGATGCCAT TATTGCAGGG
GAAAATATTT ATACGCACAT GCAAGAAGGC ATGCCATTTT CAAGTGCAGC GCAGCTTGGC
GCACAAGAAG TTGCCAAACC GTTAACCTTT GCAATATTAA CCAACATCAT CGCATTTATC
CCTCTGCTCT TTTTACCCGG TTTTATGAAG TTGATGTTTG GTGCAATACC TGTGGTTGTT
ATTCTATGCT TTGTTATTTC ATGGCTTGAA GCCTTATTTA TATTACCTGC ACACTTGGCA
AGAATTAACC AAAAAACAAC TAAAACCCCA GGTAATAATA TACTCAGTAA ATCAGCCTAT
TATTTTAGTT TTGCCATGCA AAAGGCTCAA CAAAATTTTG ACAAAGCCTT AGAGAGCTTT
ATTCAACACC CGTATTTATC GGTATTGAAA AAATGCCTCT CATGGCCGGC TCTAACATTA
TCTATTGCTT CGCTAATTTT ATTATGGGTT TTAGGTTATG CCTTTAGTGG AAAAATGGGC
TTTAGTTTAA TGCCAAAAAT GGAGGGCCGT TGGGTAAAAG CGAGTATAGT ATTACCTGAA
GATTTTACTT TAATGCAAAT GAATAAAGTA AAAGACAAGC TTGAAAGTAA TGCTAAAGAG
ATGCTCTCAA AAAACGAAAT TGAGCAGGCA GTTATTAGTA TTAGAAGTGA AATTTTTGAA
AACACCTTAG AAGTAGGTTT ATTACTCGTT GACAGTGAAG AGCGTGAAAT TAGCTCAGTT
GATATAAAAA GCCTATGGCG AGAGCAATCA AAATTATTAG GCAAGCAATC TTTAAACAAT
TTAGGCAAGC TGCGTTTTGG AAGTGCCCGA AAAAATAGTA ACAGCCAAAT TGAAGCTTCT
ATCACTCTTG AGCTTAGACA CAATGATACT AACGTATTAA GTAATGCAGC TATCGCAGCG
CAAAACTACC TTCAAAGTGA CCAGCAAAGT GGACAATACA TTACCAGTAT TACCAACTCA
ATGGAGCAAG GTAACCCACA ATGGTCATTA ACCTTAAATG AAAATGGTCA AAGCTTAGGG
TTTAATGGAA GTGATGTTGC TAAACAATTA CGTTCTTCAC TGTATGGTGC ACGAGTTACC
CGCCAGCACA GAGGACAAAA CGAAGTCACT GTATTAGTAC GGCTACCATT AAGAGAAAGG
CAAAGTTCTG GTGATATTGA AAACCTACTG ATTAGTACGG GCGATGGCGG CTTTGTCCCC
TTAAATGAAA TAGCAAACAT CAGTAAAACT TACAGCCCGG CCACAATTAA ACGCTATAAA
AATCAACGTA TAGAACAGCT TTATATTGAA GTAGAAGATG AAACTAAAAC CCCACAAGTT
AATGATTTTA TTCATCAGCA ACTCACTCTT AGACTTACTC GCCAGTTTGC TGGATTAAAA
GTTTCAATGA GTGGTGATCA AAAAGAGATA GCGCAAAGTG TTTCTAAGCT TGAGTTAGGT
ACCCTTTTTG CGCTTACTGG TATTTATATA TTATTAGCCA TTGCTTTTAA AAGTTACCTG
CAACCTTTAC TCATTATGGC CATTATTCCT TTTGGCGCTG TGGGTGCTAT TTTAGGTCAT
TTACTGTTAG GTTTTGGCTT AAGCATTGTG AGTTTAATGG GCATGCTTGC CCTTGCTGGT
GTGGTAATCA ACGACAGCCT AATAATGGTG GAATACGCCA ATAAACAAGT AACACAAGGG
CACAAACCTA AACAAGCAAT TATTAATGCT GGCATGCGTC GCTTTCGTCC AATACTACTA
ACCACACTGA CCACTTTTGG CGGTTTAGCC CCCATGGTTT TTGAAACATC ACGCCAAGCT
CAATTTATTG TACCTATGGC TGTATCACTT GGCTTTGGCA TTTTATTCAC AACCTTTATT
TGTTTATTAG TGCTACCTTG TTTATACCTA ATAACAAGCG AGTACAACGA TATCAAAGCT
TAA
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| Protein sequence | MFKSITKESA TDKKAAQKYN SIAWMINHGI APNLLMLLLI VGGLVMSFII RKEYMPDVTL
DRVGIVINYP GASPDEIESA IALPIEAIIT PLEGIKEVKT IIRTGRLFIR AELEGSDNAQ
KIFQDVQQAI TRINTFPTEM DKPRIFLASK VRDVMEIVVH GDLDAIGIKR LSEEIRDRIL
QSVDISKVTL HGTAKEEIHI DISQHMLNSL QTDLSTIAKK ISLLTKEQST GTIKSNSGNI
LVKVDERLLW ADEFAQLSIM PDKNGGALQL KDVAKITEGF ADSKSMITFD GQLAASLRIY
RVGEQSPDKI GKAIEAMWPE LEALLPPTAG LTIIDDDAKN YQKRLSLLLK NAFFGLLLVL
FFMSLFLDFR LAFWVVAGIP SAFLGAILFL PSFGISINMV SMFGFIIALG IVVDDAIIAG
ENIYTHMQEG MPFSSAAQLG AQEVAKPLTF AILTNIIAFI PLLFLPGFMK LMFGAIPVVV
ILCFVISWLE ALFILPAHLA RINQKTTKTP GNNILSKSAY YFSFAMQKAQ QNFDKALESF
IQHPYLSVLK KCLSWPALTL SIASLILLWV LGYAFSGKMG FSLMPKMEGR WVKASIVLPE
DFTLMQMNKV KDKLESNAKE MLSKNEIEQA VISIRSEIFE NTLEVGLLLV DSEEREISSV
DIKSLWREQS KLLGKQSLNN LGKLRFGSAR KNSNSQIEAS ITLELRHNDT NVLSNAAIAA
QNYLQSDQQS GQYITSITNS MEQGNPQWSL TLNENGQSLG FNGSDVAKQL RSSLYGARVT
RQHRGQNEVT VLVRLPLRER QSSGDIENLL ISTGDGGFVP LNEIANISKT YSPATIKRYK
NQRIEQLYIE VEDETKTPQV NDFIHQQLTL RLTRQFAGLK VSMSGDQKEI AQSVSKLELG
TLFALTGIYI LLAIAFKSYL QPLLIMAIIP FGAVGAILGH LLLGFGLSIV SLMGMLALAG
VVINDSLIMV EYANKQVTQG HKPKQAIINA GMRRFRPILL TTLTTFGGLA PMVFETSRQA
QFIVPMAVSL GFGILFTTFI CLLVLPCLYL ITSEYNDIKA
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