| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2376 |
|---|
| Symbol | |
|---|
| ID | 3519938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 2479359 |
|---|
| End bp | 2480378 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637284833 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_269094 |
|---|
| Protein GI | 71279479 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0719999 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAA TAACAATCAA AGATGTAGCA CTAAGGGCTG GGGTTTCTGT TAAAACTGTG
TCACGAGTGA TAAATAATGA AGTTAACGTT CGTGCCGAGA TGCAAGAGAA AGTTAAAAAA
GCGGTAAATG AATTAGGTTT TCGTAGAAAC CCCTTAGCGA GGGCACTACG GAATCAACAG
ACGTCTATTT TAAGTTTACT GTATTCAAAT CCCAACCCTG GTTATATTCT AGAAGTACAA
AACGGTATTC AAGCGCAATG TGATCTTGAT AATTATAATT TGCAAATATT GCCTTGTGAT
CATAACGATG AACATTTTTT TGAAAAGATA GAATCGTTAT TGCAACGTTC ATCGACCGAT
GGGGTATTAT TGATAGAGCC ACTTTGTGAT ATGCCAGAGG TCATTGATTT ATTGGATAAA
TATAAATTAC CTTATGCGCT GATATCTCCA GCAACTTCAA AGCCTAAAGC ACCTTTTGCT
CGCTCTAACG ATGAGCAAGC CTCATATCAA ATGACAGAAT ACTTGATATC TCAAGGGCAT
AAAGATATTG CTTTTATTAT GGGTGACCCA AGCCATGGTG ATAGTCATCA GCGGTTAAAA
GGTTACCAAA ATGCTTTAGC TGAATATAAT ATTTCAGTAG ATGATACATT TTTTGAGCAA
GGCTATTTTA CTTTTGAATC AGGTGAAATA TCAGCTAGAC GATTATTGTC ACTTAAAAAT
AGGCCTTCGG CCATTTTTGC TAGTAATGAT TATATGGCTG CAGCGGTATT AAAAGTTGCC
GCACAAAAGC AGATTAAAGT ACCACAAGAG CTCTCTATTG TTGGTTATGA TGACACCCCT
GTATCAAAAC AAATATGGCC TGCACTAACA ACGGTTAGAC AACCAATACG AGATATATCT
TCACACGCGA CAAAAAAACT CATTGCTCAA CTTAATAAAT GCTCATTTGA TGAGGTAAAA
ACCTTGTTTG AATGTCAACT AGTGGTGCGA GAGTCAACCA GTGTTTGGGC AAGTGATTAA
|
|---|
| Protein sequence | MTKITIKDVA LRAGVSVKTV SRVINNEVNV RAEMQEKVKK AVNELGFRRN PLARALRNQQ
TSILSLLYSN PNPGYILEVQ NGIQAQCDLD NYNLQILPCD HNDEHFFEKI ESLLQRSSTD
GVLLIEPLCD MPEVIDLLDK YKLPYALISP ATSKPKAPFA RSNDEQASYQ MTEYLISQGH
KDIAFIMGDP SHGDSHQRLK GYQNALAEYN ISVDDTFFEQ GYFTFESGEI SARRLLSLKN
RPSAIFASND YMAAAVLKVA AQKQIKVPQE LSIVGYDDTP VSKQIWPALT TVRQPIRDIS
SHATKKLIAQ LNKCSFDEVK TLFECQLVVR ESTSVWASD
|
|---|
| |