| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2372 |
|---|
| Symbol | |
|---|
| ID | 3521747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 2474265 |
|---|
| End bp | 2475308 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637284829 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_269090 |
|---|
| Protein GI | 71281276 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0241326 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTATA AACAAGAAAA GCGTAGGGCA GCTATTAAAA AAATTGCTTT TGTTGTTGGT
GGGATAGCTA TTGCACCAAC ATTAATCTCT CAATCATTAG CAAAACCCTT TTTAGCCAGT
AATCCCATTT TGCCCTTTCA AATATCTTTA TCTCAATGGG CGTTTGAAAG TGAAATTTTT
GGCAAAGGAC GTGATAACTA CAAATGGTTT AAAAAAATGT TAGAGGAGGA TCCTCAGGCT
GTTTTGCAAG GCTCTATGGA TACAACTGAC ATTGTTGTTA AAGCACAGAA GCTTGGTTTA
CATGGCGTTG ATTTAGTCAC CTCGATGATT TATGGACATA GAAATAATAC GAAGTGGTTA
CGTAACTTTA AGCAAAAAGG CAAAGACCAT GATGTTTCAT TTATTTGTTT AATGGCTGAT
ACCGCTACAA AAATTGGGGC AAGTGATTTA TTAGCGCGCA AAAAAGCAGT AGATGATCAC
AAGCATTGGA TAGAAGCGGC AGTAGAGTTA GGGTGTGAGC ATATCAGAGT AAATCCTTTT
GGTGATGGCA CCTATTTACA GCAAATGAAC CAATGTTCAG AGTCTTTATA TGAATTAAGT
GAGTTTGCTA GCAATGTTGG CATGCAACTT ACCGTTGAAA ATCATGGCCA CCCTTCAAGT
AATGGCGCAT GGTTGAACAT GTTAATAGAA TTAACTAATC ATAGTAATTT AGGTCTTTTT
CTAGATTTTG GTAATTTCTT TATGGGTGGT TTTAATGCTA AACCTAGACG CTGGTATGAT
TTAAAACAAG GTGTAATCGA CTTAGCTCCA TTTACGGTTG GAATAAGCGG TAAAGCACGA
AGTTTCTTAC CTAATGGTGA TATTGAAATG ATTGATTATG ATTGGAATAT GGAGCAGGTA
TTGGCATCAG GCTTTAATGG TTGGGTTAGT GCTGAATATG CTGGAAAAGA GTATTCAAAT
ACTCAAGGAG CCCAAATGAT TATTGATAAA TTGAGAAAGC TTCAAGAAAA ACATAAACAA
AGTCGAACTA ATTTAATGAC TTAG
|
|---|
| Protein sequence | MNYKQEKRRA AIKKIAFVVG GIAIAPTLIS QSLAKPFLAS NPILPFQISL SQWAFESEIF
GKGRDNYKWF KKMLEEDPQA VLQGSMDTTD IVVKAQKLGL HGVDLVTSMI YGHRNNTKWL
RNFKQKGKDH DVSFICLMAD TATKIGASDL LARKKAVDDH KHWIEAAVEL GCEHIRVNPF
GDGTYLQQMN QCSESLYELS EFASNVGMQL TVENHGHPSS NGAWLNMLIE LTNHSNLGLF
LDFGNFFMGG FNAKPRRWYD LKQGVIDLAP FTVGISGKAR SFLPNGDIEM IDYDWNMEQV
LASGFNGWVS AEYAGKEYSN TQGAQMIIDK LRKLQEKHKQ SRTNLMT
|
|---|
| |