| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2369 |
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| Symbol | |
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| ID | 3520099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2468407 |
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| End bp | 2471451 |
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| Gene Length | 3045 bp |
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| Protein Length | 1014 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637284826 |
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| Product | glycosy hydrolase family protein |
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| Protein accession | YP_269087 |
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| Protein GI | 71279640 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.195451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACT ATAAATGTAC CTTTGCCCTT ATGCTTATTT TCTGTTTGGG AGTACAAGGT
TGTGGCTCTG AAGAGCAAGT AATAGAAGAA CTACCAATAC TTGAAATTCC AGTTGAGGAT
GCTCCAGTAG AGGATGTTCC AGTTGAGGAA ATTCCAGTTG AGGAAGCTCC AGCTGAGGAA
GTTCCAGTTG AGGAAGATCC AGTTGAGGAA GTTCCAGTTG AGGAAGCTCC AGCTGAGGAA
GATGTTGAAC TTTCTGCATT TGAACTAGCG ATGGCAAAAT GTAATAACCC TTGGAATGAG
CTAGGTGTAG CGTTAAATGA TAATAGTGAG TTGCTAAATG ACCCATTATT ATCGACATGT
TATCGTGTGT CAGGGGTTGT TGATGGCTTA ATTGATGACA ATATTGACTT GTCAATTAAT
GGTGCTGAAA CGCTAGCGGT GGCAAGTGAG GGGCAATTTG AATTTGTTAC TCCTTTTATC
AGTGATGAAA CGTTTATATT GAGCGTAAAA ACTGCAGCAA CAAAACATCA ATGTAATTTG
ATTAATAACA GCGGCACAAT TAATGATGAG CAAGCCAATA ACCTTATTGT TCATTGTATA
GCTACTACCA GCCAATGTGA TAAAACCACA GAAAATATTA CTGATGATAA AAACTTCTCA
GGTAATAATA TTGAAGGAAT TGAGAGTCTT GTTAGTGATA TTGAATGTGG TGTAGAACCA
TGGCGAGAAG CAGCTAACGA ACGTATCAAT AACATTCGTA AAACGTCAGG TACTATTACT
ATTGTTGATA AAAATGGTGA GCCAGTAACT AACGCTAAAG TGAACTTAAC CCTTAACCGT
CATAACTTTA AGTTTGGGGG AATTGCTCAG GCAAAATTAT GGCATGGTGA AGCCGATGAT
GTTGCAGATC TATATAAAGC GGCTTATTTA GATTTTGGTT TTAATAAAGG TGGTTTTCAA
AACGCTTTAA AATATAAATT AAGAGCAGGT TTAGAGCCTT TAGTACCAGC TATGCTTACT
TGGTTTAAAG CGCATGATAT CCCTGTGCGT GGGCATGCGT TGATCTGGCC AAAATGGACG
AATATGGAAA CAACAGTATC AGCACAAGAT GCATTAGATA TGGGCATTAC CCAAGGAGAT
GTTGCGAACC TTCCCAGTGA TGAACTGAAA ATTTATGTTG ATACCACGAT TAGAAATTGG
GCGAGTAAGT GGGATGTTGT TGAGTGGGAT GTTGCTAACG AATTACGAGG TCACTACGAT
GTGCAAGATA TTCTAGGCTA TCAAGAAGAA GCACATTGGT ACAAATTAGC TAAGGCCAAT
GTTCAAAATT CGGCGACATT ATTTATTAAT GATAATCGAA TTATATCAGA TAGCAGTGAA
ACTGTGGTTT CAGATAAAGT TGCAGGCTAT AAAAGTAATG TTGAAAGTAT TCTTGCAGAC
GATACGTTAA ATGAAGGTCA TGTTGAAGCG CTTGGATTTC AAAGTCGCTT TGGTTCGATG
TTATCTGCGG ATACTATTTA TCAACGTTTA TCCTATTTTG ATGACTTAAA TCTGCCAATT
TCAGCGACGG AATTTGAGAT TAAAGATGAC TTGATAACCA CAGAGATTGA CCGCGCTGTT
TTAACTGAAC GAGTGATGAC TGTTTACTTT AGTAAAGAAA GTGTCAGTGA TATTTTAGTC
TGGACATTTT TTGAAAGCTC TAGCCGAAGT GATGCTCGCC ATTTAGTCGA CTTAGAAGGC
AATGCTAATT TACGAGGAAA AACGTGGTTG TATTTAGTTA AGAAACATTG GAATACCGAT
GTTACCACTT GGTTAGATAG GCAGGGGGAA ACACAGCTAA ACGGCTTTAA AGGTGAATAT
ACTGCAACGG TATCTTTTAC AAATTACCCT GATGAGCAGG TTGACTTCTC TTGGATTGAT
GGCACAAAGG GTAAAACAAT TCAGTTACTT AATTACGCCA ATGGTAGCGA CAGTGCAACA
CCTGCTAGTT TCAGTATTGA TAGTTTTGAA AATACTGAAG TAGAGGAAGG CGTTATGTTT
ACTAGTACAG TACCGACCCT GTCAGGTGAT GATAATATTG GCGCTATTAC TTGGACTGTA
ACCGGTGATG ATGCCAACTT ATTTAACCTT AACTCTATAA CTGGCGTTTT AAGCCTTACA
GCACAAGACT TTGAATCACC AGCTGATACT GATATTGATA ATAACTATGC GGTTATTTTA
ACTGCGACGG ATGCTGTTGG TAATTTTGCA GAATTAGCTT TAGAGCTCGT TGTAACTGAT
AATCTTGCCG ATAACCAAGT ACTAGTAAAC TTCACTATTG ATGAATTCAT TACCACAACA
ATTGCTGAAA ATGTAATTTA TAGCAGTGAG CTGCCAAACC TTTCTGGTGA TGAAGCAGTT
GGTAGTGTTA TTTGGACTGT TGAAGGCGAT GATGCTAATT TATTTGTTGT CGATTCATCG
ACAGGTGCAT TAACTTTAGC GGCTCAAGAT TTTGAAAATG CTAATGATTT AGCTGGAGAT
AATGACTATC TAGTAACACT TGTCGCGACT GATTCAGAAG ATAATTTCGC CCAACTAGCA
TTAGTTATTT CAGTAACCAA TGTTGATGAA GTTGTTGTTT ATTCACCACC TGAGATTAGT
GGTGACAATG GTGATATTTC GAGTGTTATC AATGCTGGTG ATTTAGTTTT TACTCGTCCA
GCCCTGGCGA CGGAAACGAC ACTTGATGGT GGCGCTGCCA CAGTTGAAGG TAATAAATGG
AAGTTATTCA ATTGGAGTGA AGCCGAAGCT TACTGTAGTG ATATTGGTGC AAGATTACCA
ACTAAAACAG AGTTATCAGA TAACTTATTA ACGTTAGTTA ATGATGCCGA CTTGGTTAGC
AATGGCAGTT TCTCCGCTAC CGAGCATTGG CCTGTAAATA AAGGTTACTG GGCTAGCACT
TTTCCTGAGG ATGGTAAACA TCACTTAATG AAAACAAGCA TAGATCCGGC AAAAATGTCA
GCTTTAGCTG ATACCAACCG TCAATATGTA ACTTGTGTTA GATAA
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| Protein sequence | MKNYKCTFAL MLIFCLGVQG CGSEEQVIEE LPILEIPVED APVEDVPVEE IPVEEAPAEE
VPVEEDPVEE VPVEEAPAEE DVELSAFELA MAKCNNPWNE LGVALNDNSE LLNDPLLSTC
YRVSGVVDGL IDDNIDLSIN GAETLAVASE GQFEFVTPFI SDETFILSVK TAATKHQCNL
INNSGTINDE QANNLIVHCI ATTSQCDKTT ENITDDKNFS GNNIEGIESL VSDIECGVEP
WREAANERIN NIRKTSGTIT IVDKNGEPVT NAKVNLTLNR HNFKFGGIAQ AKLWHGEADD
VADLYKAAYL DFGFNKGGFQ NALKYKLRAG LEPLVPAMLT WFKAHDIPVR GHALIWPKWT
NMETTVSAQD ALDMGITQGD VANLPSDELK IYVDTTIRNW ASKWDVVEWD VANELRGHYD
VQDILGYQEE AHWYKLAKAN VQNSATLFIN DNRIISDSSE TVVSDKVAGY KSNVESILAD
DTLNEGHVEA LGFQSRFGSM LSADTIYQRL SYFDDLNLPI SATEFEIKDD LITTEIDRAV
LTERVMTVYF SKESVSDILV WTFFESSSRS DARHLVDLEG NANLRGKTWL YLVKKHWNTD
VTTWLDRQGE TQLNGFKGEY TATVSFTNYP DEQVDFSWID GTKGKTIQLL NYANGSDSAT
PASFSIDSFE NTEVEEGVMF TSTVPTLSGD DNIGAITWTV TGDDANLFNL NSITGVLSLT
AQDFESPADT DIDNNYAVIL TATDAVGNFA ELALELVVTD NLADNQVLVN FTIDEFITTT
IAENVIYSSE LPNLSGDEAV GSVIWTVEGD DANLFVVDSS TGALTLAAQD FENANDLAGD
NDYLVTLVAT DSEDNFAQLA LVISVTNVDE VVVYSPPEIS GDNGDISSVI NAGDLVFTRP
ALATETTLDG GAATVEGNKW KLFNWSEAEA YCSDIGARLP TKTELSDNLL TLVNDADLVS
NGSFSATEHW PVNKGYWAST FPEDGKHHLM KTSIDPAKMS ALADTNRQYV TCVR
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