| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2359 |
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| Symbol | |
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| ID | 3521144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2452565 |
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| End bp | 2455312 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637284816 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_269077 |
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| Protein GI | 71280676 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.975634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGAA CTTTTAATAA AACACTATTA AGTGTAAGTA TTCTCGCTAT TCTTAGCGGA
GCCACTATCG TTCAAGCGGC CGAAACTAGC ACAACAGTTG AAGTTGAAAA GAAAGCGAGT
GCTAAAAAAG CTAAAAAGAA AGATGACAAA GGAATTGAAG TCATTGAAGT TGTCGGTACC
CGTGGCAGCT TAAAACGCTC TATGAATGCG AAGCGCTTTT CTGATCAAGT AATGGATGGT
GTTTCTGCTG AAGATATCGG TAAGCTACCT GATAATAATA TTGCCGAAGC ACTTTCTCGT
GTTGTTGGTG TATCAATGTC CCGTGCTGAT GGTGAAGGTG AGTTTGTAAG TATTCGCGGT
ATGGCGCCAG GGCTAAGCCA AGTTACTTTA AATGGTCAAT CAATGGCCAA TAGTAATAGT
AAATCTATTA CCAGTAATGG TGCATCAAGT CGTAGCTTTA ATTTAAATAA TATCGCCAGT
GAAATGGTTG CGGGTATAGA AGTCTTTAAA AGCCCAATTG CAAGTATGGT AGAAGGCTCT
GTTGGTGGTA CGGTTAATTT GAAAAGCCGT AGCCCTATTG ATTCCGGTAA TAAAGCAACC
ATAACAGCTC GTGCTGATTA TAATGAAAAT GCGGCTGCGG CAGGTGGCGG TTTAAATTTA
TTCTTAAATG GCGTCAATGA TGATGAAACC TTTGGTTCCT CTGTTGCTGT AAGTTATTTT
GACAGAACTA CGCAGCGTAA TAGTTTTGAA AGTCGCGGTT GGGCACTACA AAAAAAAGCG
CCTTATGTAA ACGAATATAA CGAAGATGGT ACGCTAAATA AAGCAGGTGT TAGTGATACA
CCTGTCTATC GTATTGAAGA TATCCGTGCC AACTTTAGAC ACGATGAGCG AGAACGCATC
AATGTTAATG CTAAAGCACA ATGGCTAATT TCAGATGAGT TAGATTTTAG TGTTGATGCT
CTCTATAGCC GTCAGCAACG TAATTTTATT TCAACAAACT GGGATGTTGA TTTTAGAGAT
AATGATAAAC TGATTGTTGA CATGGACAGT ATTGTAATTG ATGGCGAAAA TGTTGTATCA
CAAATTGCCA GCGCAAATGA CAAGGCAGGT AAAAACTATA ATCATGAACA AACAGGTTTT
GATCGCTCTT ATGATGATGA AACCATTGCG GTAAACTTTA CACTTGATTA CATGCTAAAT
GACAATTGGA CCATAACACC TAAAATTGGC TATAGCCAAG CGACAGGTTT ACGTGATGAT
ATTAATCCTT TATTCAGTAC CAAAGTTCAA AATTTAGGAT ACAGTTTACC TAATGGTAGT
TACATGCCAG AAATTATTTA CCCAACTGAC CCTGATGAAT TAGCGGCAAT GAACCCTGAA
AATCTCCAAC TCGATGTAAT GAACTATAAA AGTTTTGAAG TAGAAGATCA GCAAGGTTAC
GTACAATTAG ATTTATCTAC TGATTTAGAC AATGAATATA TCAGCTCAAT TGAATTTGGT
GCTCGTTATA ATGAAATTCA AAAAACTAAC CAAGTATTTC AAGATAAAAT CCAAGCTGAT
ATTTTAGAGG CTAATGGTGG CACACAAATT ATTTTATCAG ATTATTCAAA TTATACAGTA
ACGGATGGCA TGTTAGACAA CGCCCCTGTA GATGCTTGGT ATGTGCCTGA CTTTGACAAA
ATCGATCAAG AGTTTGGCCA CCTTGTTGAA AAGCTGGAAG TTCAAAGAGA AAATTATGAA
ATAACTGAAA GTGTTACTGC TGCTTATGTT CAAGCCAATA TTGATACTGA ACTCTTGACT
ATTCCTGTAC GCGGTAATCT TGGGGTTAGG TATGTAGACA CAAAGATAGA GTCGACAGCT
TATAAATTCT TAGCAGGTGA AGATCCAGCT TTAACTGAAT CAGACAAAGA TTATCAAGAT
GTACTGCCAA GTATTAATTT AGCCTTTAAC CTTAAAGATG ACTTAATTTT ACGTACTGCT
GCCGCTAAAG TAATGGCGCG GCCTAACCAT GCTGACATTG CACCAGTATT TAGAGAAATA
CGTTCATGGG ATGCAGAGGA TGGCGGCAAG TATATCATCG GAAATCCAGA CTTAGACCCA
TACCGTGCAA ATCAGTTTGA TTTAAGTGCT GAATGGTATT TTGACAGTGA AGGTTTATTA
TCTACAGGTA TCTTTTATAA AGACATAGAA TCCTTCATTA CCACTAGAAC TGAATCAACA
ACATTGCCAG GTATTGGTGA TGGTACACCA TATGAAGTCA CTCAACCTAT TAATGGTGAA
GGTGGTGTTG TACAAGGTTT TGAAGTTAGT TTTCAACAAG CATTCTATAT GTTACCAGAG
CCGTTTGATG GCCTAGGTAC CGCAATAAAC TATACCTATA ATGACAGTGA AACGGAATTA
ATTAACAACG TTACTGGTGA GTTTATGAGC TTACCTGGCT TGTCACAAGA TACAGCTAAC
TTTATGGTTT ATTATGAAAA ATATGGCTTT AGTACTCGTT TGGCATGGAA CTATCGTAGC
GAATACTTTA ATCAGTTCTC TTGGTCTGAA GAGGCGCTGT ATATAGAAGC TTATGATCAG
TTAGATTTCC AATTGGGTTA TGACTTTACT AAGAAAATGT CTATTAATTT TGAAGCGAAA
AATATTACAG ATGAGACAGT ATATGAGTAT GTTGGTAACC CTTCTCGCGC ATATGCGGTT
CGTGATAACG GCAGAACATT TAGCTTAAGC TTTAAGTACG CACTTTAA
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| Protein sequence | MKRTFNKTLL SVSILAILSG ATIVQAAETS TTVEVEKKAS AKKAKKKDDK GIEVIEVVGT
RGSLKRSMNA KRFSDQVMDG VSAEDIGKLP DNNIAEALSR VVGVSMSRAD GEGEFVSIRG
MAPGLSQVTL NGQSMANSNS KSITSNGASS RSFNLNNIAS EMVAGIEVFK SPIASMVEGS
VGGTVNLKSR SPIDSGNKAT ITARADYNEN AAAAGGGLNL FLNGVNDDET FGSSVAVSYF
DRTTQRNSFE SRGWALQKKA PYVNEYNEDG TLNKAGVSDT PVYRIEDIRA NFRHDERERI
NVNAKAQWLI SDELDFSVDA LYSRQQRNFI STNWDVDFRD NDKLIVDMDS IVIDGENVVS
QIASANDKAG KNYNHEQTGF DRSYDDETIA VNFTLDYMLN DNWTITPKIG YSQATGLRDD
INPLFSTKVQ NLGYSLPNGS YMPEIIYPTD PDELAAMNPE NLQLDVMNYK SFEVEDQQGY
VQLDLSTDLD NEYISSIEFG ARYNEIQKTN QVFQDKIQAD ILEANGGTQI ILSDYSNYTV
TDGMLDNAPV DAWYVPDFDK IDQEFGHLVE KLEVQRENYE ITESVTAAYV QANIDTELLT
IPVRGNLGVR YVDTKIESTA YKFLAGEDPA LTESDKDYQD VLPSINLAFN LKDDLILRTA
AAKVMARPNH ADIAPVFREI RSWDAEDGGK YIIGNPDLDP YRANQFDLSA EWYFDSEGLL
STGIFYKDIE SFITTRTEST TLPGIGDGTP YEVTQPINGE GGVVQGFEVS FQQAFYMLPE
PFDGLGTAIN YTYNDSETEL INNVTGEFMS LPGLSQDTAN FMVYYEKYGF STRLAWNYRS
EYFNQFSWSE EALYIEAYDQ LDFQLGYDFT KKMSINFEAK NITDETVYEY VGNPSRAYAV
RDNGRTFSLS FKYAL
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