| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2340 |
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| Symbol | gap1 |
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| ID | 3518584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2438430 |
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| End bp | 2439434 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637284797 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_269060 |
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| Protein GI | 71278814 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.283409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATTA AAGTTGGCAT AAATGGTTTT GGCCGTATTG GTCGTTTTGT ATTCAGAGCT
GCTGTAGAGC GTGATGATAT TGAAGTTGTT GGTATCAACG ATTTAATGGA CATTGAATAC
ATGGCGTATA TGTTGAAGTA TGATTCAACA CATGGCCGTT TTAAAGGTAC TGTTGATGTT
GTTGACGGGA AATTAATTGT TAACGGTAAT CCAGTTCGTG TTACTGCAGA ACGTAACCCT
GAAAATTTAC AATGGAATGA TATCGATGTA GATGTTGTTG TTGAAGCTAC CGGTTTATTC
CTAACTGATG AGACTGCACG TAAACATATT ACAGCCGGCG CTAAGCAAGT TGTTTTAAGT
GCACCTTCAA AAGATGATAC CCCTATGTTT GTTTGTGGTG TCAACTTAAA CGAATATAAA
GGCCAAGAAA TAGTTTCTAA TGCTTCATGT ACTACCAACT GTTTAGCACC TATTGCTAAG
GTCTTAAATG ACAATTGGGG CATCCAAGAT GGTTTAATGA CTACTGTACA TGCGACAACA
GCCACTCAGA AAACTGTTGA TAGCCCATCA ACTAAAGACT GGCGCGGTGG TCGTGGTGCA
GGACAGAACA TTATACCTTC AACTACTGGT GCTGCTAAAG CGGTAGGTAA AGTAATTCCA
GCGTTAAATG GTAAATTAAC TGGCATGGCA TTTCGAGTTC CAACGCCTGA CGTTTCTGTC
GTTGATTTAA CTGTTAACCT GATAAAACCA GCAACTTACG CTGAAATTTG TCAAGCGATG
AGTGCTGCCG CCGAAGGCGA GTTGAACGGT ATTTTAGGTT ACACTGAAGA TGCTGTTGTT
TCTAACGACT TCATTGGTGA AACTTGTACT TCAGTTTTTG ATGCGAAAGC GGGTATTGCG
TTAACTGATA CTTTCGTTAA AGTTGTTTCT TGGTATGATA ATGAAATTGG TTATTCAAAC
AAGGTATTAG ATCTTGTTGC TTTCATCAGC CAATATGAAA AATAA
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| Protein sequence | MKIKVGINGF GRIGRFVFRA AVERDDIEVV GINDLMDIEY MAYMLKYDST HGRFKGTVDV
VDGKLIVNGN PVRVTAERNP ENLQWNDIDV DVVVEATGLF LTDETARKHI TAGAKQVVLS
APSKDDTPMF VCGVNLNEYK GQEIVSNASC TTNCLAPIAK VLNDNWGIQD GLMTTVHATT
ATQKTVDSPS TKDWRGGRGA GQNIIPSTTG AAKAVGKVIP ALNGKLTGMA FRVPTPDVSV
VDLTVNLIKP ATYAEICQAM SAAAEGELNG ILGYTEDAVV SNDFIGETCT SVFDAKAGIA
LTDTFVKVVS WYDNEIGYSN KVLDLVAFIS QYEK
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