| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2339 |
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| Symbol | pyrF |
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| ID | 3519100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2437615 |
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| End bp | 2438310 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637284796 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_269059 |
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| Protein GI | 71278298 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0256145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGATC CAAAAGTAGT TGTCGCCTTA GACTTTGATA GAAAACAAGA TGCCTTATCT
TTTGTTGATA AGATTCAGCC TACAGATGCC CGCTTGAAAG TTGGCAAAGA AATGTTTACT
TATTTCGGCC CTGAATTTGT TAAGCAATTA ACAGGTAAGG GATTTGATGT TTTTCTTGAT
CTTAAATTTC ATGATATCCC TAACACGGTA GCAAAAGCGG TTACGGCTGC GGCAGACTTA
GGTGTATGGA TGGTGAATGT TCATGCCAGT GGTGGTAGTC AGATGATGAC TAAAGCAAAA
CAAGCATTAG ATAATTATGG CAACGATGCG CCATTATTAA TAGCGGTAAC CGTACTTACA
AGTATGGGTC AAGAAGACCT TCATGGCTTA GGTATTAATA AAACACCAGC AGAGCAAGTT
AACTTTTTAG CTAACTTAAC AAAACAAAGC GGCTTAGATG GCGTTGTTTG TTCAGCTTGG
GAAGCAGAGC AATTAAAGGC TGACTTGGGT AAAGAGTTTA AACTGATTAC GCCAGGAATT
AGACCTGCGG GCTCAGCACA AGACGATCAA CAACGTATTA TGACTCCAAA ACAGGCAATT
GATGTTGGCG TAGACTATTT GGTGATCGGA CGTCCAATTA CCAAAGCTGT TGATCCTCAA
TTAGTATTAC AACAAATTAA CGGTACCATC CGCTAA
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| Protein sequence | MNDPKVVVAL DFDRKQDALS FVDKIQPTDA RLKVGKEMFT YFGPEFVKQL TGKGFDVFLD
LKFHDIPNTV AKAVTAAADL GVWMVNVHAS GGSQMMTKAK QALDNYGNDA PLLIAVTVLT
SMGQEDLHGL GINKTPAEQV NFLANLTKQS GLDGVVCSAW EAEQLKADLG KEFKLITPGI
RPAGSAQDDQ QRIMTPKQAI DVGVDYLVIG RPITKAVDPQ LVLQQINGTI R
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