| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2335 |
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| Symbol | rpsA |
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| ID | 3519189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2433740 |
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| End bp | 2435401 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637284792 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_269055 |
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| Protein GI | 71278192 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00568908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAA ATTTTGCGCA ACTTTTTGAA GAAAGTTTAA AAGAAATCGA AACACGTCCT
GGATCAATCA TCCGTGGAAC AATCGTAGCC GTTAACAAAG ACAATGTAAT TGTTGATGCT
GGCTTAAAAT CTGAGAGTGT TATCTCAATT GATCAATTTA AAAACGCTGC TGGTGAAGTT
GAAGTAGTTG TTGGCGATGA AATTGATGTA GCCTTAGATG CAACAGATGA TGGTTTCGGT
GAAACTATTC TTTCTCGTGA AAAAGCAAAA CGTCACGAAG CATGGCAAGT GCTTGAAAAA
GCATATGAAG AAAAAGAAAC TGTTATCGGT GTTATCAACG GTAAAGTTAA AGGTGGTTTC
ACTGTTGAAG TTAGCGATAT CCGTGCTTTC TTACCAGGTT CATTAGTAGA TGTTCGTCCA
GTACGTGACA CTGCTCACCT TGAAGGCAAG CCTCTAGAAT TTAAAGTTAT TAAGCTTGAT
CAAAAGCGTA ATAACGTAGT TGTTTCACGT CGTGCTGTAA TCGAAGCTGA AGGCAGTGCA
GAACGTGATG AATTACTTGA GTCATTAGCA GAAGGCCAAG AAGTTAAAGG TATCGTTAAG
AACCTTACTG ACTACGGCGC ATTTGTTGAC TTAGGCGGCA TTGATGGTTT ATTACATATC
ACAGATATGG CTTGGAAACG CGTTAAGCAC CCAAGTGAAA TCGTAAATGT TGGTGATGAA
ATACAAGTTA AAGTATTGAA ATTCGACCGT GAGCGCACTC GTGTATCTCT AGGTATGAAG
CAGTTAGGCG AAGATCCATG GGTAGCAATT GCTAACCGTT ACCCAGAAGG TTCTAAACTT
TCTGGTCGCG TAACTAACTT AACTGACTAC GGTTGTTTCG TTGAAATCCA AGAAGGCGTT
GAAGGTTTAG TTCACGTTTC TGAAATGGAT TGGACTAACA AAAACATCCA CCCATCTAAA
GTTGTTAACT TAGGTGACAC AGTAGAAGTT CTAGTATTAG AAATTGACGA AGAACGTCGT
CGTATTTCTT TAGGTCTTAA ACAGTGTATT GCTAACCCTT GGGAAGAGTT TGCTAAAAAC
TTCAACAAAG GCGACAAAGT ATCAGGTAAG ATCAAGTCAA TTACTGACTT CGGTATCTTC
ATCGGTCTTG ACGGCGGCAT TGATGGTTTA GTTCACTTAT CTGATATTTC ATGGGCTGGC
GGTGAAGAAG CTGTTCGTGA TTATAAGAAA GGCGATGAAA TCGACGCTAT CGTTCTTCAA
GTTGACCCTG AACGTGAGCG TATCTCGTTA GGCGTTAAAC AAGCTGAAGA CGACCCGTTC
AATATGTATC TTGCAGATAA GAAAAAAGGT GCTATTGTTA CTGGTAAGGT AACTGAAGTT
GATGCTAAAG GCGCAACTAT CTTGTTAGCT GAAAGTGTTG AAGGTTACCT ACGTGTTAGC
GACATTTCTG TAGAGCGTAT CGAAGATGCA TCTACAGTAT TAAAAGTTGG TGACGACGTT
GAAGCTAGAT TTATGGGTGT GGATCGTAAG AACCGTACTA TTAGTCTATC TATCAAAGCA
AAAGATCAAG CTGATGAACG TGAAGCAATG GATAACCTAA ACCAAGTAGA AGAAACTGGT
TTAAGTGCTA TGGCTGCTGC GTTTAAAAAC GCTAAAAACT AA
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| Protein sequence | MTENFAQLFE ESLKEIETRP GSIIRGTIVA VNKDNVIVDA GLKSESVISI DQFKNAAGEV
EVVVGDEIDV ALDATDDGFG ETILSREKAK RHEAWQVLEK AYEEKETVIG VINGKVKGGF
TVEVSDIRAF LPGSLVDVRP VRDTAHLEGK PLEFKVIKLD QKRNNVVVSR RAVIEAEGSA
ERDELLESLA EGQEVKGIVK NLTDYGAFVD LGGIDGLLHI TDMAWKRVKH PSEIVNVGDE
IQVKVLKFDR ERTRVSLGMK QLGEDPWVAI ANRYPEGSKL SGRVTNLTDY GCFVEIQEGV
EGLVHVSEMD WTNKNIHPSK VVNLGDTVEV LVLEIDEERR RISLGLKQCI ANPWEEFAKN
FNKGDKVSGK IKSITDFGIF IGLDGGIDGL VHLSDISWAG GEEAVRDYKK GDEIDAIVLQ
VDPERERISL GVKQAEDDPF NMYLADKKKG AIVTGKVTEV DAKGATILLA ESVEGYLRVS
DISVERIEDA STVLKVGDDV EARFMGVDRK NRTISLSIKA KDQADEREAM DNLNQVEETG
LSAMAAAFKN AKN
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