Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2333 |
Symbol | aroA |
ID | 3521927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2431263 |
End bp | 2432543 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637284790 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_269053 |
Protein GI | 71281455 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.446103 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAACAGT TAACATTAAA TCCAATAGGT AAAATTAATG GAGAAATATT TTTACCTGGT TCTAAAAGTT TATCTAACCG TGCCTTGTTA ATTGCGGCGT TAGCTAATGG TGTTACAAAA ATCACTAATT TATTAGTGAG TGATGACATC AACCATATGC TAAATGCGTT AAAAAGCCTT GGTATTGAAT ATACGTTAAG CGATTGTGGT ACTGAGTGTA CTGTTATCGG AAATGGTGGC TTTTTCAATG CTAAAAAACC ATTGGAACTG TACTTAGGTA ACGCAGGTAC GGCGATGCGC CCATTGTGTG CTGCACTTGC GGCAAGCGAA GGTGAGTTTA TCTTAACCGG TGAACCAAGA ATGAAAGAGC GGCCGATTGG TCATTTAGTT GATGCTTTAG CACAACTTGA TGCCGATATA GAATACTTGG AAAATAAAGA TTACCCACCT GTAAAAATTA AAGGTAAAGC GTTAACTGGC AATACAGTGA CCATTGATGG TTCTATATCG AGTCAGTTTT TAACTGCTAT CTTGATGATT GCACCTTTAC TAGAAACCAA TACCACAATA GAAATTGATG GTGAGTTAGT TTCCAAACCC TACATTGATA TTACGCTTGA TATTATGCGT AGATTTAATG TCAGTGTTCA AAATAATGAC TACAAGTCTT TCATCGTTAA CGGTAAGCAG TCATATCAAG CGCTAGATAA ATATATGGTG GAAGGTGATG CATCTTCTGC GTCATATTTC TTAGCAGCTG GCGCTATAAA AGGTGGTGAA GTTACTGTTC ATGGTATTGG TAAGCTCAGT GTCCAGGGCG ACAAACATTT TGCCGATGTT CTTGAAAAAA TGGGTGCAGA AATTCATTGG AAGGATGAGT CAATCACTGT TATCGGTAAG CCGTTGACAG CAGTAGATAT GGATATGAAT CATATTCCTG ATGCGGCAAT GACTATTGCT ACCACCGCAC TTTTTGCGAC AGGTACTACA ACCATTAGAA ATATATATAA CTGGCGTGTA AAAGAAACAG ACCGATTAAA CGCAATGGCG ACGGAACTAA GAAAGGTTGG AGCTGAGGTT GTTGAAGGCA AAGATTATAT TTCAATTACT CCACCAAAAT CACTGAAACA TGCAGAAATT GATACCTATA ATGATCATAG AGTTGCTATG TGTTTCTCTC TTGTTGCTTT GAGTGATACC CCCGTTACTA TTAATGATCC TAAGTGTACG GCGAAAACAT TCCCAGACTA TTTTGACAAG CTAGCACAAG TTTCTTGTTA A
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Protein sequence | MEQLTLNPIG KINGEIFLPG SKSLSNRALL IAALANGVTK ITNLLVSDDI NHMLNALKSL GIEYTLSDCG TECTVIGNGG FFNAKKPLEL YLGNAGTAMR PLCAALAASE GEFILTGEPR MKERPIGHLV DALAQLDADI EYLENKDYPP VKIKGKALTG NTVTIDGSIS SQFLTAILMI APLLETNTTI EIDGELVSKP YIDITLDIMR RFNVSVQNND YKSFIVNGKQ SYQALDKYMV EGDASSASYF LAAGAIKGGE VTVHGIGKLS VQGDKHFADV LEKMGAEIHW KDESITVIGK PLTAVDMDMN HIPDAAMTIA TTALFATGTT TIRNIYNWRV KETDRLNAMA TELRKVGAEV VEGKDYISIT PPKSLKHAEI DTYNDHRVAM CFSLVALSDT PVTINDPKCT AKTFPDYFDK LAQVSC
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