| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2311 |
|---|
| Symbol | |
|---|
| ID | 3521771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 2411087 |
|---|
| End bp | 2412151 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637284768 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_269031 |
|---|
| Protein GI | 71281300 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTCAA GTTCAAATAA TAGCTCTATT GCGAAAGCAT TTGTAACAGT CGCCGCTATT
TTTATCATTT TTGCGGGTAT TAAAACCGCG GCTAATATTT TAGTGCCGTT TTTACTTTCA
GTATTTATCG CCATCATCTG TAACCCATTA ATCAATAAAG CCAGTGAGTA TAAAATACCA
AAGGCTGTTT CTGTCATTTT TGTTATAGTT GTCTTTGTTA CTATGGCTGT GTTTTTAACG
GGATTAGTGG GCAGCTCTTT AAATGAGCTT TCTCAGCAGA TACCTCAGTA CCGAATACAA
CTCAAAGAAC AATTTACTTG GTTAACAAGT TTCCTTAATA GTCATGACAT CCAACTTTCT
TCATCGATAG TGACTGAATA TTTTGACCCT GCTGCAGCGA TGGGGTTAGC GGCTGATATG
TTATCCAGTT TTGGCTCTGT GATGACAAAC TTGTTTTTGA TTATTTTAAC TGTTGTTTTC
ATGTTGTTTG AATCATCGAC GATTCCACAT AAATTACATT TAGCATTAGA TGATCCTCAA
ATGCGTTTAA ATCAAATTGA ACGGTTTTTA TCTTCGGTGA ATCAGTATAT AGCCATTAAA
ACACTGGTTA GTATTGCCAC GGGTTGTATT GTGTCACTGA TGTTATGGAT CTTTGGTTTA
GACTTCTTTT TACTCTGGGG TGTATTAGCG TTTCTGCTTA ATTATATACC AAATATCGGT
TCTATTATTG CCGCAGTGCC ACCAATGACG CTCGCTATCT TACAATTAAG CATAGGGGAG
GCCGGCGCTA TCGGTTTAGG TTTTGTTTTA ATAAATATGG TAATGGGTAA TATTATTGAG
CCTAGGTATC TAGGTAAAGG TCTAGGGCTA TCGACTTTAG TTGTTTTCTT ATCTCTAATT
TTTTGGGGAT GGTTGCTTGG TACTGTAGGT ATGCTATTAA GTGTGCCACT GACCATGATA
TTAAAGATAG GGTTAGAAAG CTCACCAGAA GGTCGTTGGT TGGCTGTCAT GCTAAGTGAT
GAAGTTGAAC TGGTCGATAA AACCGAGCAA GCTTTACTTG ATTGA
|
|---|
| Protein sequence | MVSSSNNSSI AKAFVTVAAI FIIFAGIKTA ANILVPFLLS VFIAIICNPL INKASEYKIP
KAVSVIFVIV VFVTMAVFLT GLVGSSLNEL SQQIPQYRIQ LKEQFTWLTS FLNSHDIQLS
SSIVTEYFDP AAAMGLAADM LSSFGSVMTN LFLIILTVVF MLFESSTIPH KLHLALDDPQ
MRLNQIERFL SSVNQYIAIK TLVSIATGCI VSLMLWIFGL DFFLLWGVLA FLLNYIPNIG
SIIAAVPPMT LAILQLSIGE AGAIGLGFVL INMVMGNIIE PRYLGKGLGL STLVVFLSLI
FWGWLLGTVG MLLSVPLTMI LKIGLESSPE GRWLAVMLSD EVELVDKTEQ ALLD
|
|---|
| |