Gene CPS_2308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_2308 
Symbol 
ID3520496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand- 
Start bp2407108 
End bp2407728 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content38% 
IMG OID637284765 
ProductGDSL family lipase/acylhydrolase 
Protein accessionYP_269028 
Protein GI71280033 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.85334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCGTT TTATCCTAAA ATCTATTATT ATTTTAATTT TGACAAACCT ATCATTTACC 
AGCATGGCAA ATGATAAAAT TTTACTTATT GGTGACAGCT TAAGCGCTGG CTATGGACTT 
GAGCAAGCAC AAGCATGGGT TCATTTGTTA CAAAATAAAT ATAGAGAAGA TAATAAACCT 
GTCACCATCA TAAATACAGC GATCAGTGGT CAAACTACGG ATAATGCCTT ATTAAAAATT 
GATGCTTGGC TTGACGCTCA CCAGCCTAGC CATGTGCTAA TTGAATTGGG TGGTAATGAT 
GGTATCAGAG GTTTTCCAGT GAAGTTATTG CAAAAACATT TAACTGAGCT GGTGACCAAG 
AGTCAACAAT ATGGCGCGAA AGTCGCTTTA ATGGAAATTC AAATCCCCCC GAACTTGGGC 
CAAAGATACC GTAAAATGTT TACTGATAGC TATACCAAAG TGACCGATCA AACGGGCGCC 
CATCTTATGG CTTACTTTAT GACAGATGTT GCCATTGATT CTTCGCTAAT GCTCAATGAT 
AACTTACACC CCAATGCAAA AGCACAACCT ATCATCCGTG ATTTTATGTA TAGCGAAATT 
GATAAATGGT TACAAAAGTA A
 
Protein sequence
MTRFILKSII ILILTNLSFT SMANDKILLI GDSLSAGYGL EQAQAWVHLL QNKYREDNKP 
VTIINTAISG QTTDNALLKI DAWLDAHQPS HVLIELGGND GIRGFPVKLL QKHLTELVTK 
SQQYGAKVAL MEIQIPPNLG QRYRKMFTDS YTKVTDQTGA HLMAYFMTDV AIDSSLMLND 
NLHPNAKAQP IIRDFMYSEI DKWLQK